C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001T6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198791-ENSG00000155975 CGP 9606 8:17224964-17302427
GeneTranscriptPositionBiotype
ENSG00000003987 (MTMR7)
myotubularin related protein 7
ENST00000180173 (MTMR7-001) 17298030-17413327 protein_coding
ENST00000517317 (MTMR7-006) 17313385-17413307 nonsense_mediated_decay
ENST00000518272 (MTMR7-005) 17331200-17349237 processed_transcript
ENST00000519122 (MTMR7-008) 17326317-17349057 processed_transcript
ENST00000519590 (MTMR7-003) 17302202-17311673 retained_intron
ENST00000519763 (MTMR7-009) 17304439-17311863 processed_transcript
ENST00000521177 (MTMR7-007) 17372995-17413528 retained_intron
ENST00000521857 (MTMR7-002) 17301651-17413327 protein_coding
ENST00000523571 (MTMR7-004) 17338730-17349485 processed_transcript
ENSG00000155975 (VPS37A)
vacuolar protein sorting 37 homolog A (S. cerevisiae)
ENST00000324849 (VPS37A-001) 17246571-17298024 protein_coding
ENST00000425020 (VPS37A-002) 17247094-17297587 nonsense_mediated_decay
ENST00000518038 (VPS37A-005) 17246938-17268372 protein_coding
ENST00000519381 (VPS37A-007) 17246931-17268273 nonsense_mediated_decay
ENST00000519515 (VPS37A-011) 17298107-17302427 processed_transcript
ENST00000520140 (VPS37A-004) 17246934-17295277 nonsense_mediated_decay
ENST00000520997 (VPS37A-010) 17296461-17300282 processed_transcript
ENST00000521005 (VPS37A-006) 17247244-17248007 protein_coding
ENST00000521162 (VPS37A-009) 17295964-17300131 processed_transcript
ENST00000521829 (VPS37A-003) 17247123-17295052 protein_coding
ENST00000521976 (VPS37A-008) 17276436-17286611 protein_coding
ENSG00000198791 (CNOT7)
CCR4-NOT transcription complex, subunit 7
ENST00000361272 (CNOT7-001) 17224964-17246878 protein_coding
ENST00000518021 (CNOT7-005) 17242994-17246857 nonsense_mediated_decay
ENST00000518541 (CNOT7-012) 17230568-17234860 protein_coding
ENST00000518885 (CNOT7-009) 17244327-17246572 processed_transcript
ENST00000519918 (CNOT7-011) 17234593-17245091 protein_coding
ENST00000519954 (CNOT7-006) 17232329-17246857 nonsense_mediated_decay
ENST00000519998 (CNOT7-003) 17241294-17245052 retained_intron
ENST00000520178 (CNOT7-008) 17243181-17246448 protein_coding
ENST00000522062 (CNOT7-010) 17234801-17237595 retained_intron
ENST00000523649 (CNOT7-004) 17244740-17246865 retained_intron
ENST00000523917 (CNOT7-002) 17231570-17246878 protein_coding
ENST00000524358 (CNOT7-007) 17237242-17246609 protein_coding
CIL_0001T6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031601-ENSMUSG00000031600 CGP 10090 8:40492540-40551134
GeneTranscriptPositionBiotype
ENSMUSG00000031600 (Vps37a)
vacuolar protein sorting 37A (yeast)
ENSMUST00000098817 (Vps37a-201) 40511783-40551134 protein_coding
ENSMUSG00000031601 (Cnot7)
CCR4-NOT transcription complex, subunit 7
ENSMUST00000034012 (Cnot7-001) 40492540-40511754 protein_coding
ENSMUST00000128237 (Cnot7-007) 40510023-40515835 processed_transcript
ENSMUST00000132032 (Cnot7-006) 40492542-40515847 protein_coding
ENSMUST00000132200 (Cnot7-010) 40500733-40507585 processed_transcript
ENSMUST00000132740 (Cnot7-011) 40495597-40507668 retained_intron
ENSMUST00000135269 (Cnot7-003) 40492547-40511718 protein_coding
ENSMUST00000139558 (Cnot7-008) 40510103-40511304 processed_transcript
ENSMUST00000142455 (Cnot7-009) 40494014-40501072 processed_transcript
ENSMUST00000144970 (Cnot7-004) 40492543-40511718 retained_intron
ENSMUST00000146280 (Cnot7-002) 40507318-40511722 processed_transcript
ENSMUST00000149992 (Cnot7-005) 40493036-40511304 protein_coding
ENSMUSG00000039470 (Zdhhc2)
zinc finger, DHHC domain containing 2
ENSMUST00000049389 (Zdhhc2-001) 40423815-40485725 protein_coding
ENSMUST00000128166 (Zdhhc2-003) 40423821-40510266 protein_coding
ENSMUST00000131672 (Zdhhc2-002) 40423822-40466190 retained_intron
ENSMUST00000164934 (Zdhhc2-004) 40500451-40510268 processed_transcript
ENSMUST00000167766 (Zdhhc2-201) 40423840-40484269 protein_coding
ENSMUST00000168799 (Zdhhc2-005) 40424104-40454615 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001T6_0001ENSG00000003987ENST00000180173ENSG00000155975ENST00000324849ENST00000520140ENST00000521829ENSG00000198791ENST00000361272ENST00000523917CIL_0001T6_0002ENSMUSG00000031600ENSMUST00000098817ENSMUSG00000031601ENSMUST00000034012ENSMUST00000132032ENSMUST00000132200ENSMUST00000135269ENSMUST00000139558ENSMUST00000146280ENSMUST00000149992ENSMUSG00000039470ENSMUST00000049389ENSMUST00000128166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003987 ENST00000180173 N/A N/A N/A 9.299±1.48 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155975 ENST00000324849 3.796±0.00 2.816±0.00 N/A 6.372±0.00 3.443±0.75 5.609±0.00 3.161±1.30 4.859±0.00 2.454±0.00 4.602±0.00 6.643±0.00 4.002±0.44 4.037±0.25 6.533±0.00
ENST00000425020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.453±0.00 14.183±0.00
ENST00000520997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521829 N/A N/A N/A N/A N/A N/A 8.749±4.01 8.597±0.00 16.413±0.00 12.936±0.00 N/A 13.187±0.00 16.733±0.00 37.810±0.00
ENST00000521976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198791 ENST00000361272 3.307±0.00 4.774±0.00 7.032±0.00 9.510±1.65 4.415±0.69 9.535±4.42 2.107±0.00 4.318±1.81 5.473±4.03 8.574±5.64 4.310±1.58 6.963±4.70 4.772±0.38 6.151±1.35
ENST00000518021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523917 6.970±0.00 6.857±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031600 ENSMUST00000098817 4.043±1.68 16.876±10.53 6.761±0.01 7.205±2.22 7.081±4.82 6.054±1.70 2.635±0.54 3.862±1.24 4.410±1.68 5.150±1.21 8.488±0.86 11.029±6.34 5.809±1.37 6.173±2.40
ENSMUSG00000031601 ENSMUST00000034012 5.908±3.05 22.164±1.27 13.021±1.24 20.362±9.80 4.339±1.81 6.330±2.74 5.770±0.74 5.812±1.76 7.786±3.53 9.506±1.20 13.571±0.89 10.905±3.96 10.963±4.30 9.862±4.16
ENSMUST00000128237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132032 N/A N/A N/A N/A 1.798±0.00 N/A N/A N/A 1.219±0.19 N/A N/A 16.544±0.61 7.355±0.00 N/A
ENSMUST00000132200 N/A N/A N/A 231.959±0.00 N/A N/A N/A N/A N/A N/A N/A 261.482±0.00 201.681±57.71 201.380±0.00
ENSMUST00000132740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.220±0.00 3.617±0.00 N/A
ENSMUST00000139558 N/A N/A N/A N/A N/A 3.548±0.00 N/A 4.701±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000142455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.786±0.00 N/A
ENSMUST00000149992 3.054±1.30 N/A 3.195±0.35 17.417±0.48 2.791±0.92 1.556±0.11 1.374±0.00 1.440±0.09 2.367±1.02 4.724±0.09 N/A 5.617±2.08 5.591±0.39 3.471±2.60
ENSMUSG00000039470 ENSMUST00000049389 2.002±0.55 N/A N/A 9.623±2.66 1.613±0.42 1.480±0.03 N/A N/A 2.379±0.28 N/A N/A 2.781±0.82 5.140±0.42 N/A
ENSMUST00000128166 N/A N/A N/A N/A N/A 1.327±0.02 N/A N/A N/A N/A N/A 4.482±0.00 N/A N/A
ENSMUST00000131672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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