C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP2B, member of RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049064 Rap2b-201 ENSMUSG00000036894 10090 + 3:61364507-61368703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049064 7.504±1.99 7.185±2.05 4.103±2.60 5.956±0.68 11.422±6.24 3.874±0.39 1.409±0.24 1.848±0.08 1.376±1.06 6.319±1.13 0.686±0.10 16.065±5.84 1.790±1.28 1.510±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0016020 IDA membrane
GO:0019003 IEA GDP binding
GO:0019904 IPI protein domain specific binding
GO:0030168 IEA platelet activation
GO:0030336 IDA negative regulation of cell migration
GO:0031954 IDA positive regulation of protein autophosphorylation
GO:0032486 IDA Rap protein signal transduction
GO:0045121 IEA membrane raft
GO:0055037 IDA recycling endosome
GO:0055038 IDA recycling endosome membrane
GO:0061097 IDA regulation of protein tyrosine kinase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058967 rap2b-201 protein_coding Danio_rerio 0 675
ENSDART00000058877 rap2ab-001 protein_coding Danio_rerio 0 497
ENSDART00000109750 CABZ01067868.1-201 protein_coding Danio_rerio 0 488
ENST00000245304 RAP2A-001 protein_coding Homo_sapiens 0 512
ENST00000323534 RAP2B-001 protein_coding Homo_sapiens 0 1279
ENST00000476869 RAP2A-002 nonsense_mediated_decay Homo_sapiens 0 449

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