C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAP2A, member of RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476869 RAP2A-002 ENSG00000125249 9606 + 13:97434471-97464710 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000476869
Transcript ID Testis
ENST00000476869 2.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041S CIL_00041S_0001 CGP 13:97221434-97469128
CIL_0000O3 CIL_0000O3_0001 CGP 13:97434222-98024297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062117 Rap2a-201 protein_coding Mus_musculus 0 532
ENSMUST00000066298 B430305J03Rik-201 protein_coding Mus_musculus 0 449
ENSMUST00000049064 Rap2b-201 protein_coding Mus_musculus 0 449
ENSDART00000058967 rap2b-201 protein_coding Danio_rerio 0 448
ENSDART00000058877 rap2ab-001 protein_coding Danio_rerio 0 444
ENSDART00000109750 CABZ01067868.1-201 protein_coding Danio_rerio 0 411
ENSMUST00000156694 Rap2a-001 protein_coding Mus_musculus 0 359

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