C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: blocked early in transport 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049166 Bet1-001 ENSMUSG00000032757 10090 - 6:4076899-4086972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049166 8.256±1.02 10.281±3.25 13.983±2.38 5.699±3.66 5.311±0.89 4.426±0.80 3.769±0.46 8.976±1.44 16.730±4.85 9.749±2.37 8.512±0.94 6.287±2.96 11.850±6.27 4.525±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E1 CIL_0006E1_0002 CGP 6:4003943-4086972
CIL_0006DY CIL_0006DY_0002 CGP 6:4076899-4541543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006888 ISO ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 TAS vesicle-mediated transport
GO:0019905 IEA syntaxin binding
GO:0031985 IEA Golgi cisterna
GO:0048280 IEA vesicle fusion with Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222547 BET1-001 protein_coding Homo_sapiens 0 608
ENST00000357520 BET1-005 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000421309 RP5-1033K19.2-001 processed_pseudogene Homo_sapiens 0 195
ENST00000425626 BET1-004 protein_coding Homo_sapiens 0 359
ENST00000433727 BET1-002 protein_coding Homo_sapiens 0 390
ENST00000457139 BET1-003 protein_coding Homo_sapiens 0 501
ENST00000466347 GIMAP5-007 processed_transcript Homo_sapiens 0 340
ENST00000471446 BET1-006 processed_transcript Homo_sapiens 0.0000000000006 79
ENST00000482276 RP5-1051J4.4-001 processed_pseudogene Homo_sapiens 0 396

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