C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), delta 1, catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440232 POLD1-002 ENSG00000062822 9606 + 19:50384339-50418014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000440232
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000440232 3.189±0.00 5.900±0.00 0.311±0.21 1.340±0.98 1.574±1.19 0.715±0.59 1.973±1.34 0.946±0.25 3.503±2.82 3.337±0.00 6.864±3.39 6.276±2.04 8.088±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000109 IDA nucleotide-excision repair complex
GO:0000166 IEA nucleotide binding
GO:0000278 TAS mitotic cell cycle
GO:0000722 TAS telomere maintenance via recombination
GO:0000723 TAS telomere maintenance
GO:0000731 IMP DNA synthesis involved in DNA repair
GO:0003676 IEA nucleic acid binding
GO:0003677 IDA:IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0003887 IMP:IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006260 IMP DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006284 TAS base-excision repair
GO:0006287 IDA base-excision repair, gap-filling
GO:0006289 TAS nucleotide-excision repair
GO:0006297 IMP nucleotide-excision repair, DNA gap filling
GO:0007346 IBA regulation of mitotic cell cycle
GO:0008408 IBA 3'-5' exonuclease activity
GO:0009411 TAS response to UV
GO:0016020 IDA membrane
GO:0016235 IDA aggresome
GO:0032201 TAS telomere maintenance via semi-conservative replication
GO:0043137 IBA DNA replication, removal of RNA primer
GO:0043625 IBA delta DNA polymerase complex
GO:0044281 TAS small molecule metabolic process
GO:0045004 IBA DNA replication proofreading
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055089 IMP fatty acid homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049343 Pold1-001 protein_coding Mus_musculus 0 3395
ENSMUST00000151793 Pold1-003 nonsense_mediated_decay Mus_musculus 0 2654
ENSMUST00000138746 Pold1-002 retained_intron Mus_musculus 0 1583
ENSDART00000055859 pold1-201 protein_coding Danio_rerio 0 715
ENSMUST00000141742 Pold1-008 retained_intron Mus_musculus 0 675
ENSMUST00000136225 Pold1-011 retained_intron Mus_musculus 0 608
ENSMUST00000154783 Pold1-012 retained_intron Mus_musculus 0 422
ENSMUST00000123787 Pold1-009 retained_intron Mus_musculus 0 381
ENSMUST00000147503 Pold1-010 retained_intron Mus_musculus 0 368

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