C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049449 Ptpn7-001 ENSMUSG00000031506 10090 + 1:135132725-135145317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049449
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049449 0.953±0.22 0.252±0.07 0.616±0.14 0.163±0.10 4.539±1.48 0.675±0.16 0.240±0.06 0.247±0.17 2.330±2.02 1.205±0.16 0.061±0.04 0.428±0.13 0.312±0.14 0.700±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 TAS protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005856 IEA cytoskeleton
GO:0006470 IMP protein dephosphorylation
GO:0009898 IEA cytoplasmic side of plasma membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309017 PTPN7-001 protein_coding Homo_sapiens 0 1408
ENST00000358540 PTPN5-001 protein_coding Homo_sapiens 2e-24 119
ENST00000367279 PTPN7-003 protein_coding Homo_sapiens 0 1387
ENST00000396168 PTPN5-006 protein_coding Homo_sapiens 2e-24 119
ENST00000396170 PTPN5-002 protein_coding Homo_sapiens 2e-24 119
ENST00000435759 PTPN7-015 protein_coding Homo_sapiens 0 529
ENST00000462815 PTPN7-010 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000464870 PTPN7-018 protein_coding Homo_sapiens 0 568
ENST00000467283 PTPN7-017 protein_coding Homo_sapiens 0 617
ENST00000468385 PTPN7-008 retained_intron Homo_sapiens 0 209
ENST00000476061 PTPN7-020 protein_coding Homo_sapiens 0 630
ENST00000477554 PTPN7-005 protein_coding Homo_sapiens 0 1387
ENST00000477625 PTPN7-013 protein_coding Homo_sapiens 0 756
ENST00000477854 PTPN5-004 protein_coding Homo_sapiens 2e-24 119
ENST00000479092 PTPN7-014 processed_transcript Homo_sapiens 0 451
ENST00000480836 PTPN7-007 nonsense_mediated_decay Homo_sapiens 0 1003
ENST00000486116 PTPN7-016 protein_coding Homo_sapiens 0 597
ENST00000491584 PTPN7-019 retained_intron Homo_sapiens 0 405
ENST00000492977 PTPN7-004 processed_transcript Homo_sapiens 0 1085
ENST00000495688 PTPN7-011 nonsense_mediated_decay Homo_sapiens 0 1406
ENST00000496197 PTPN7-009 nonsense_mediated_decay Homo_sapiens 0 1162

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