C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers family 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049977 Dpf1-001 ENSMUSG00000030584 10090 + 7:29303976-29317588 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049977
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049977 0.132±0.00 0.193±0.00 0.280±0.00 14.921±5.58 0.037±0.01 0.090±0.04 0.088±0.02 0.020±0.00 0.051±0.03 0.161±0.04 0.393±0.14 0.774±0.28 0.324±0.25 0.939±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IMP nervous system development
GO:0008270 IEA zinc ion binding
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099148 dpf1-201 protein_coding Danio_rerio 0 496
ENSDART00000152658 dpf1-002 protein_coding Danio_rerio 0 359
ENST00000355526 DPF1-004 protein_coding Homo_sapiens 0 1857
ENST00000366353 DPF3-005 nonsense_mediated_decay Homo_sapiens 6e-40 171
ENST00000381216 DPF3-002 nonsense_mediated_decay Homo_sapiens 9.99967e-42 176
ENST00000412732 DPF1-201 protein_coding Homo_sapiens 0 2047
ENST00000414789 DPF1-005 protein_coding Homo_sapiens 0 1857
ENST00000416611 DPF1-003 protein_coding Homo_sapiens 0 1659
ENST00000418517 DPF1-006 nonsense_mediated_decay Homo_sapiens 0 2013
ENST00000420980 DPF1-001 protein_coding Homo_sapiens 0 852
ENST00000438060 DPF1-010 protein_coding Homo_sapiens 0 1131
ENST00000438365 DPF1-011 protein_coding Homo_sapiens 0 654
ENST00000456296 DPF1-002 protein_coding Homo_sapiens 0 1991
ENST00000471976 DPF1-008 retained_intron Homo_sapiens 0 857
ENST00000472656 DPF1-012 retained_intron Homo_sapiens 0 592
ENST00000473716 DPF1-009 retained_intron Homo_sapiens 0 998
ENST00000475938 DPF1-007 retained_intron Homo_sapiens 0 1002
ENST00000488378 DPF1-014 retained_intron Homo_sapiens 0 375
ENST00000494031 DPF1-013 retained_intron Homo_sapiens 0 643
ENST00000541685 DPF3-201 protein_coding Homo_sapiens 1.99993e-41 176
ENST00000546183 DPF3-001 protein_coding Homo_sapiens 3e-40 171
ENST00000556509 DPF3-004 protein_coding Homo_sapiens 3.99931e-42 176
ENST00000556902 DPF3-007 processed_transcript Homo_sapiens 7e-32 141
ENST00000586624 DPF1-015 protein_coding Homo_sapiens 0 464
ENST00000610283 DPF3-202 protein_coding Homo_sapiens 8e-40 171
ENST00000614244 DPF1-202 protein_coding Homo_sapiens 0 1445
ENST00000614862 DPF3-203 protein_coding Homo_sapiens 7e-40 171

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