C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers, family 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381216 DPF3-002 ENSG00000205683 9606 - 14:72661876-72894101 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000381216
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000381216 0.025±0.00 0.161±0.00 0.871±0.00 0.746±0.00 0.075±0.00 1.226±0.00 0.418±0.00 0.125±0.02 0.111±0.00 0.482±0.45 0.071±0.00 0.756±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YT CIL_0008YT_0001 VISTA 14:72179551-72781734
CIL_00033C CIL_00033C_0001 CGP 14:72619296-72959703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0008150 ND biological_process
GO:0008270 NAS zinc ion binding
GO:0016568 IEA chromatin modification
GO:0046872 IEA metal ion binding
GO:0071565 ISS nBAF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177959 Dpf3-202 protein_coding Mus_musculus 0 1681
ENSMUST00000144237 Dpf3-002 protein_coding Mus_musculus 0 1411
ENSMUST00000177801 Dpf3-201 protein_coding Mus_musculus 0 1400
ENSMUST00000133282 Dpf3-003 protein_coding Mus_musculus 0 1380
ENSMUST00000178756 Dpf3-203 protein_coding Mus_musculus 0 1245
ENSMUST00000147469 Dpf3-001 protein_coding Mus_musculus 0 929
ENSMUST00000140327 Dpf3-004 protein_coding Mus_musculus 0 296
ENSDART00000123387 dpf3-201 protein_coding Danio_rerio 0 222
ENSMUST00000065181 Dpf1-005 protein_coding Mus_musculus 7.00649e-44 183
ENSMUST00000138993 Dpf1-006 retained_intron Mus_musculus 7.00649e-44 183
ENSMUST00000108230 Dpf1-003 protein_coding Mus_musculus 7.00649e-44 183
ENSMUST00000049977 Dpf1-001 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000108231 Dpf1-002 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000154222 Dpf1-004 processed_transcript Mus_musculus 6e-40 171
ENSMUST00000137848 Dpf1-007 protein_coding Mus_musculus 7e-19 100

Loading