C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 518A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050092 Zfp518a-201 ENSMUSG00000049164 10090 + 19:40894705-40917947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050092 1.017±0.36 0.748±0.30 0.854±0.13 0.916±0.53 0.963±0.24 0.854±0.31 0.580±0.16 0.670±0.20 0.612±0.47 1.170±0.14 0.516±0.09 1.218±0.89 3.417±0.97 0.957±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071R CIL_00071R_0003 CGP 19:40831279-40917947
CIL_0001C3 CIL_0001C3_0003 CGP 19:40894705-40994535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316045 ZNF518A-006 protein_coding Homo_sapiens 0 3179
ENST00000478086 ZNF518A-002 protein_coding Homo_sapiens 0 990
ENST00000534948 ZNF518A-001 retained_intron Homo_sapiens 0 3179
ENST00000614149 ZNF518A-201 protein_coding Homo_sapiens 0 3179
ENST00000624776 ZNF518A-202 protein_coding Homo_sapiens 0 3179

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