C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholesterol 25-hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050562 Ch25h-201 ENSMUSG00000050370 10090 - 19:34473786-34475135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050562
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050562 2.622±1.55 2.477±0.72 2.479±0.05 0.314±0.15 6.833±3.30 4.498±0.53 0.960±0.20 3.678±0.70 0.118±0.07 7.776±4.62 0.152±0.07 6.594±2.49 0.319±0.17 1.576±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IV CIL_0001IV_0002 CGP 19:34290659-34475135
CIL_0001IW CIL_0001IW_0002 CGP 19:34473786-34527474

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001567 IEA cholesterol 25-hydroxylase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0008203 IDA cholesterol metabolic process
GO:0008395 IDA steroid hydroxylase activity
GO:0016021 IEA integral component of membrane
GO:0016126 IEA sterol biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371852 CH25H-001 protein_coding Homo_sapiens 0 704

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