C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: extracellular matrix protein 2, female organ and adipocyte specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051504 Ecm2-201 ENSMUSG00000043631 10090 + 13:49504810-49532789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051504
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051504 3.062±0.17 1.242±0.38 4.824±0.50 0.542±0.26 2.468±0.63 0.931±0.33 4.000±0.38 1.413±0.35 0.173±0.07 4.166±1.33 2.172±0.70 3.754±1.64 0.309±0.28 0.348±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005614 IDA interstitial matrix
GO:0008201 IDA heparin binding
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0070052 IDA collagen V binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130175 AP3B1 (1 of 2)-201 protein_coding Danio_rerio 0.0002 53
ENST00000344604 ECM2-001 protein_coding Homo_sapiens 0 1295
ENST00000444490 ECM2-201 protein_coding Homo_sapiens 0 1572

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