C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130175 AP3B1 (1 of 2)-201 ENSDARG00000086124 7955 - 7:29269898-29377078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130175
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130175 1.012±1.11 4.836±4.77 2.511±0.00 0.440±0.00 2.930±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OX CIL_0007OX_0006 UCNEbase 7:29216111-29381664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030123 IEA AP-3 adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033282 Bccip-001 protein_coding Mus_musculus 0.00005 55
ENSMUST00000051504 Ecm2-201 protein_coding Mus_musculus 0.0002 53
ENSMUST00000132885 Bccip-003 processed_transcript Mus_musculus 0.00005 55
ENSMUST00000157077 Bccip-002 retained_intron Mus_musculus 0.00005 55
ENST00000264183 ARID4B-201 protein_coding Homo_sapiens 0.00005 55
ENST00000366603 ARID4B-004 protein_coding Homo_sapiens 0.00005 55
ENST00000421364 ARID4B-010 nonsense_mediated_decay Homo_sapiens 0.00005 55
ENST00000471257 ARID4B-003 retained_intron Homo_sapiens 0.00005 55

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