C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1 associated regulatory protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051737 Ap1ar-201 ENSMUSG00000074238 10090 - 3:127807264-127837492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051737 8.431±2.37 24.146±10.34 9.574±0.38 13.271±7.42 5.202±0.69 33.159±7.49 4.421±1.59 18.465±2.73 8.987±3.34 10.587±3.97 6.637±0.80 13.685±4.85 16.003±5.13 5.450±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WR CIL_0008WR_0002 VISTA 3:127326841-127927904
CIL_00080F CIL_00080F_0002 VISTA 3:127613726-128215301
CIL_0007P9 CIL_0007P9_0002 UCNEbase 3:127625906-129219414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001920 IEA negative regulation of receptor recycling
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005768 IDA endosome
GO:0005794 IEA Golgi apparatus
GO:0019894 IEA kinesin binding
GO:0030133 IEA transport vesicle
GO:0034315 IGI regulation of Arp2/3 complex-mediated actin nucleation
GO:0034613 IMP cellular protein localization
GO:0035650 IEA AP-1 adaptor complex binding
GO:0048203 IEA vesicle targeting, trans-Golgi to endosome
GO:1900025 IMP negative regulation of substrate adhesion-dependent cell spreading
GO:2000146 IMP negative regulation of cell motility

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274000 AP1AR-001 protein_coding Homo_sapiens 0 924
ENST00000309703 AP1AR-002 protein_coding Homo_sapiens 0 475
ENST00000502954 AP1AR-004 retained_intron Homo_sapiens 0 219
ENST00000506522 AP1AR-005 retained_intron Homo_sapiens 0 193
ENST00000510527 AP1AR-003 retained_intron Homo_sapiens 0 494

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