C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C2 calcium-dependent domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051777 C2cd3-001 ENSMUSG00000047248 10090 + 7:100372233-100470150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051777 3.899±1.08 2.249±0.74 2.190±0.11 5.174±2.44 3.798±0.63 2.639±0.23 1.113±0.07 2.942±0.79 1.928±1.40 2.943±0.46 1.052±0.14 4.948±1.79 2.216±1.14 7.484±3.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001947 IMP heart looping
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0007389 IMP pattern specification process
GO:0007420 IMP brain development
GO:0008589 IGI regulation of smoothened signaling pathway
GO:0016485 IMP protein processing
GO:0021915 IMP neural tube development
GO:0021997 IMP neural plate axis specification
GO:0030162 IDA regulation of proteolysis
GO:0030326 IMP embryonic limb morphogenesis
GO:0034451 IDA centriolar satellite
GO:0035058 ISS nonmotile primary cilium assembly
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0061511 IDA centriole elongation
GO:0071539 ISS protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313663 C2CD3-001 protein_coding Homo_sapiens 0 4591
ENST00000334126 C2CD3-201 protein_coding Homo_sapiens 0 5325
ENST00000414160 C2CD3-005 protein_coding Homo_sapiens 0 2158
ENST00000415191 C2CD3-002 retained_intron Homo_sapiens 0 1229
ENST00000442398 C2CD3-006 nonsense_mediated_decay Homo_sapiens 0 1821
ENST00000535645 C2CD3-014 processed_transcript Homo_sapiens 0 616
ENST00000535954 C2CD3-007 protein_coding Homo_sapiens 0 492
ENST00000537285 C2CD3-012 processed_transcript Homo_sapiens 0 761
ENST00000538361 C2CD3-016 protein_coding Homo_sapiens 0 209
ENST00000538625 C2CD3-017 processed_transcript Homo_sapiens 0 621
ENST00000539061 C2CD3-003 protein_coding Homo_sapiens 0 1254
ENST00000541922 C2CD3-009 processed_transcript Homo_sapiens 0 571
ENST00000542452 C2CD3-018 processed_transcript Homo_sapiens 0 307
ENST00000542930 C2CD3-008 retained_intron Homo_sapiens 0 351
ENST00000544293 C2CD3-010 retained_intron Homo_sapiens 0 451

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