C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052012 Phka1-001 ENSMUSG00000034055 10090 - X:102513975-102644246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052012 3.090±0.43 2.407±1.18 3.984±0.48 1.996±0.49 6.405±4.69 1.865±0.97 1.468±0.08 2.166±0.63 0.823±0.37 5.017±0.44 50.934±22.97 3.547±1.64 1.577±0.17 1.305±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RW CIL_0006RW_0002 CGP X:102284639-102644246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005516 IEA calmodulin binding
GO:0005886 IEA plasma membrane
GO:0005977 IEA glycogen metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339490 PHKA1-201 protein_coding Homo_sapiens 0 4211
ENST00000373539 PHKA1-003 protein_coding Homo_sapiens 0 5138
ENST00000373542 PHKA1-001 protein_coding Homo_sapiens 0 4250
ENST00000373545 PHKA1-002 protein_coding Homo_sapiens 0 2795
ENST00000420457 PHKA1P1-001 processed_pseudogene Homo_sapiens 0 870
ENST00000541944 PHKA1-202 protein_coding Homo_sapiens 0 2795

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