C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase, alpha 1 (muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373539 PHKA1-003 ENSG00000067177 9606 - X:72580627-72714258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000373539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000373539 1.130±0.00 0.351±0.00 0.461±0.00 0.958±0.00 0.507±0.00 0.567±0.00 0.920±0.34 0.672±0.20 0.266±0.00 0.561±0.26 14.978±7.88 1.287±0.81 0.660±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RW CIL_0006RW_0001 CGP X:72329516-72714319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005516 IEA calmodulin binding
GO:0005976 IEA polysaccharide metabolic process
GO:0005977 IEA glycogen metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122022 Phka1-004 protein_coding Mus_musculus 0 5138
ENSMUST00000052012 Phka1-001 protein_coding Mus_musculus 0 5138
ENSMUST00000113611 Phka1-201 protein_coding Mus_musculus 0 4255
ENSMUST00000120270 Phka1-005 protein_coding Mus_musculus 0 4255
ENSMUST00000119229 Phka1-003 protein_coding Mus_musculus 0 4211
ENSMUST00000142534 Phka1-006 retained_intron Mus_musculus 0 3306
ENSMUST00000043596 Phka1-002 protein_coding Mus_musculus 0 2795

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