C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ORM1-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052919 Ormdl3-001 ENSMUSG00000038150 10090 - 11:98581256-98587368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052919 96.792±35.95 131.415±27.48 29.090±4.97 26.769±8.90 114.353±24.38 26.582±1.77 26.506±4.01 29.042±1.17 49.468±25.84 31.234±2.74 16.271±1.55 58.132±10.29 19.169±8.07 42.077±20.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0006672 ISS ceramide metabolic process
GO:0016021 IEA integral component of membrane
GO:0035339 ISS SPOTS complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304046 ORMDL3-001 protein_coding Homo_sapiens 0 935
ENST00000394169 ORMDL3-002 protein_coding Homo_sapiens 0 793
ENST00000579287 ORMDL3-008 processed_transcript Homo_sapiens 7e-40 167
ENST00000579695 ORMDL3-003 protein_coding Homo_sapiens 0 920
ENST00000581284 ORMDL3-006 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000584000 ORMDL3-005 protein_coding Homo_sapiens 0 486
ENST00000584220 ORMDL3-004 protein_coding Homo_sapiens 0 333

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