C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ORMDL sphingolipid biosynthesis regulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581284 ORMDL3-006 ENSG00000172057 9606 - 17:39922098-39924048 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000581284
Transcript ID Colon
ENST00000581284 2.697±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098W CIL_00098W_0001 VISTA 17:39359510-39962707
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052919 Ormdl3-001 protein_coding Mus_musculus 0 383
ENSMUST00000120064 Gm12538-001 processed_pseudogene Mus_musculus 0 324

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