C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053017 Chst9-002 ENSMUSG00000047161 10090 - 18:15451924-15718046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaTestisENSMUST00000053017
Transcript ID Bladder Brain Breast Liver Ovary Placenta Testis
ENSMUST00000053017 0.005±0.00 0.044±0.00 0.073±0.02 0.004±0.00 0.090±0.05 0.083±0.05 0.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EP CIL_0006EP_0002 CGP 18:15389394-15760157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001537 IDA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006790 IEA sulfur compound metabolic process
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284224 CHST9-201 protein_coding Homo_sapiens 0 1096
ENST00000580774 CHST9-003 protein_coding Homo_sapiens 0 1096
ENST00000581714 CHST9-002 protein_coding Homo_sapiens 0 1096
ENST00000618847 CHST9-001 protein_coding Homo_sapiens 0 1096

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