C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053664 Tmx2-201 ENSMUSG00000050043 10090 - 2:84671317-84678056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000053664
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000053664 31.025±1.84 47.827±16.55 30.593±0.00 36.815±3.27 47.603±4.33 26.205±6.01 21.274±3.95 39.697±0.00 46.180±1.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017X CIL_00017X_0002 CGP 2:84671316-84688215

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278422 TMX2-002 protein_coding Homo_sapiens 0 1068
ENST00000378312 TMX2-001 protein_coding Homo_sapiens 0 638
ENST00000436507 TMX2P1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000524972 TMX2-005 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000525035 TMX2-008 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000528042 TMX2-004 retained_intron Homo_sapiens 0 279
ENST00000528110 TMX2-009 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000528395 TMX2-CTNND1-001 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000529403 TMX2-003 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000530114 TMX2-007 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000533602 TMX2-006 nonsense_mediated_decay Homo_sapiens 0 292

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