C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TMX2-CTNND1 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528395 TMX2-CTNND1-001 ENSG00000254462 9606 + 11:57712605-57791586 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189772 CTNND1-001 protein_coding Mus_musculus 0 701
ENSMUST00000036811 Ctnnd1-003 protein_coding Mus_musculus 0 412
ENSMUST00000111693 Ctnnd1-021 protein_coding Mus_musculus 0 412
ENSMUST00000111692 Ctnnd1-011 protein_coding Mus_musculus 0 412
ENSMUST00000067232 Ctnnd1-002 protein_coding Mus_musculus 0 412
ENSMUST00000111694 Ctnnd1-022 protein_coding Mus_musculus 0 412
ENSMUST00000111695 Ctnnd1-014 protein_coding Mus_musculus 0 412
ENSMUST00000111696 Ctnnd1-006 protein_coding Mus_musculus 0 412
ENSMUST00000126092 Ctnnd1-025 processed_transcript Mus_musculus 0 387
ENSMUST00000149317 Ctnnd1-024 processed_transcript Mus_musculus 0 324
ENSMUST00000111697 Ctnnd1-202 protein_coding Mus_musculus 0 292
ENSMUST00000111691 Ctnnd1-001 protein_coding Mus_musculus 0 292
ENSMUST00000066177 Ctnnd1-004 protein_coding Mus_musculus 0 292
ENSMUST00000053664 Tmx2-201 protein_coding Mus_musculus 0 292
ENSMUST00000138529 Tmx2-005 processed_transcript Mus_musculus 0 292
ENSMUST00000123772 Tmx2-004 processed_transcript Mus_musculus 0 292
ENSMUST00000111665 Tmx2-001 protein_coding Mus_musculus 0 292
ENSMUST00000111664 Tmx2-003 protein_coding Mus_musculus 0 292
ENSMUST00000090731 Gm5499-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000152149 Tmx2-002 protein_coding Mus_musculus 0 276
ENSMUST00000111684 Ctnnd1-007 protein_coding Mus_musculus 2e-37 159
ENSMUST00000111685 Ctnnd1-012 protein_coding Mus_musculus 2e-37 159
ENSMUST00000111687 Ctnnd1-009 protein_coding Mus_musculus 2e-37 159
ENSMUST00000111689 Ctnnd1-008 protein_coding Mus_musculus 2e-37 159
ENSMUST00000111690 Ctnnd1-013 protein_coding Mus_musculus 2e-37 159
ENSMUST00000111688 Ctnnd1-016 protein_coding Mus_musculus 8e-37 158
ENSMUST00000111686 Ctnnd1-015 protein_coding Mus_musculus 8e-37 158

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