C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436507 TMX2P1-001 ENSG00000213839 9606 + 9:37885683-37886390 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436507
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436507 3.036±0.00 0.809±0.00 4.370±1.79 5.054±0.73 2.524±0.75 1.745±0.16 3.257±0.00 1.591±1.13 1.658±0.62 1.521±0.77 3.224±2.56 0.789±0.10 1.527±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081A CIL_00081A_0001 VISTA 9:37738698-38340102
CIL_0006TN CIL_0006TN_0001 CGP 9:37800502-37904353
CIL_0006TM CIL_0006TM_0001 CGP 9:37879400-38069211

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053664 Tmx2-201 protein_coding Mus_musculus 0 811
ENSMUST00000111665 Tmx2-001 protein_coding Mus_musculus 0 811
ENSMUST00000090731 Gm5499-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000111664 Tmx2-003 protein_coding Mus_musculus 0 564
ENSMUST00000138529 Tmx2-005 processed_transcript Mus_musculus 0 477
ENSMUST00000123772 Tmx2-004 processed_transcript Mus_musculus 0 279
ENSMUST00000189772 CTNND1-001 protein_coding Mus_musculus 1e-20 104
ENSMUST00000152149 Tmx2-002 protein_coding Mus_musculus 0.000000000000001 88

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