C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: desmoglein 1 gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054128 Dsg1c-001 ENSMUSG00000034774 10090 + 18:20247340-20285031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000054128
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054128 0.061±0.01 0.002±0.00 0.073±0.10 0.041±0.01 0.033±0.02 0.015±0.00 0.254±0.28 0.018±0.01 0.022±0.01 0.043±0.03 0.017±0.00 0.252±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FH CIL_0002FH_0003 CGP 18:20084703-20285031

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0030057 TAS desmosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257192 DSG1-001 protein_coding Homo_sapiens 0 1179
ENST00000462981 DSG1-002 protein_coding Homo_sapiens 0 1018

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