C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Scm-like with four mbt domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054230 Sfmbt1-001 ENSMUSG00000006527 10090 + 14:30715615-30822713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054230 0.398±0.22 0.322±0.00 1.202±0.33 1.868±0.79 0.465±0.04 0.208±0.06 0.231±0.06 0.334±0.06 1.113±0.77 0.369±0.16 0.926±0.21 0.227±0.10 1.193±1.18 2.936±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA:ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0016568 IEA chromatin modification
GO:0030154 IEA cell differentiation
GO:0042393 ISS histone binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0048635 ISS negative regulation of muscle organ development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394752 SFMBT1-001 protein_coding Homo_sapiens 0 3620
ENST00000482396 SFMBT1-005 protein_coding Homo_sapiens 0 414
ENST00000483069 SFMBT1-004 protein_coding Homo_sapiens 0 305

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