C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xyloside xylosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055389 Xxylt1-001 ENSMUSG00000047434 10090 - 16:30955627-31081432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055389
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055389 7.918±2.03 14.578±1.07 3.964±0.94 3.668±0.24 8.722±2.58 6.972±0.89 4.120±0.20 5.718±0.79 1.053±0.18 8.531±0.95 0.560±0.09 14.509±1.03 1.888±0.61 0.700±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CB CIL_0006CB_0002 CGP 16:30599723-31081432
CIL_0006CC CIL_0006CC_0002 CGP 16:30955627-31201238

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016763 IEA transferase activity, transferring pentosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310380 XXYLT1-001 protein_coding Homo_sapiens 0 1555
ENST00000356740 XXYLT1-013 protein_coding Homo_sapiens 0 501
ENST00000418940 XXYLT1-007 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000429994 XXYLT1-003 protein_coding Homo_sapiens 0 863
ENST00000437101 XXYLT1-004 protein_coding Homo_sapiens 0 641
ENST00000455281 XXYLT1-005 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000460582 XXYLT1-012 processed_transcript Homo_sapiens 0 508
ENST00000473200 XXYLT1-010 processed_transcript Homo_sapiens 0 510

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