C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006CC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173950-ENSG00000114331 CGP 9606 3:195068279-195443078
GeneTranscriptPositionBiotype
ENSG00000114331 (ACAP2)
ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 		ENST00000326793 (ACAP2-001) 195274736-195443078 protein_coding
ENST00000423531 (ACAP2-006) 195333082-195356212 protein_coding
ENST00000439666 (ACAP2-005) 195381009-195442855 protein_coding
ENST00000439758 (ACAP2-007) 195302148-195342609 protein_coding
ENST00000447662 (ACAP2-004) 195381026-195442905 nonsense_mediated_decay
ENST00000450200 (ACAP2-010) 195292314-195301644 protein_coding
ENST00000466876 (ACAP2-011) 195285328-195291745 retained_intron
ENST00000471593 (ACAP2-008) 195326332-195336965 retained_intron
ENST00000472860 (ACAP2-012) 195279034-195279799 processed_transcript
ENST00000475905 (ACAP2-009) 195295446-195302115 retained_intron
ENST00000480906 (ACAP2-002) 195335899-195443043 retained_intron
ENST00000481463 (ACAP2-013) 195342606-195442276 processed_transcript
ENST00000484296 (ACAP2-014) 195297224-195306865 retained_intron
ENST00000490224 (ACAP2-003) 195441793-195443044 retained_intron
ENST00000618471 (ACAP2-201) 195278515-195442907 protein_coding
ENSG00000173950 (XXYLT1)
xyloside xylosyltransferase 1 		ENST00000310380 (XXYLT1-001) 195068279-195271167 protein_coding
ENST00000356740 (XXYLT1-013) 195069715-195122192 protein_coding
ENST00000418940 (XXYLT1-007) 195069970-195247856 nonsense_mediated_decay
ENST00000429994 (XXYLT1-003) 195069677-195247920 protein_coding
ENST00000437101 (XXYLT1-004) 195068601-195184798 protein_coding
ENST00000455281 (XXYLT1-005) 195226724-195270861 nonsense_mediated_decay
ENST00000460582 (XXYLT1-012) 195069593-195087372 processed_transcript
ENST00000473200 (XXYLT1-010) 195069631-195154103 processed_transcript
ENST00000476897 (XXYLT1-008) 195175655-195209614 processed_transcript
ENST00000491138 (XXYLT1-009) 195070037-195209866 processed_transcript
ENST00000494175 (XXYLT1-006) 195180394-195260080 processed_transcript
ENST00000496644 (XXYLT1-011) 195070038-195094209 processed_transcript
ENSG00000207368 (Y_RNA)
Y RNA 		ENST00000384638 (Y_RNA.1-742) 195419436-195419546 misc_RNA
ENSG00000227433 (AC069213.4)
 ENST00000434369 (AC069213.4-001) 195349664-195350030 processed_pseudogene
ENSG00000229325 (ACAP2-IT1)
ACAP2 intronic transcript 1 (non-protein coding) 		ENST00000419899 (ACAP2-IT1-001) 195280723-195282741 sense_intronic
ENSG00000230266 (XXYLT1-AS2)
XXYLT1 antisense RNA 2 		ENST00000426468 (XXYLT1-AS2-002) 195147891-195152463 antisense
ENST00000447975 (XXYLT1-AS2-001) 195147871-195152790 antisense
ENSG00000244314 (RN7SL36P)
RNA, 7SL, cytoplasmic 36, pseudogene 		ENST00000469345 (RN7SL36P-201) 195146728-195147003 misc_RNA
CIL_0006CC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047434-ENSMUSG00000049076 CGP 10090 16:30955627-31201238
GeneTranscriptPositionBiotype
ENSMUSG00000047434 (Xxylt1)
xyloside xylosyltransferase 1 		ENSMUST00000055389 (Xxylt1-001) 30955627-31081432 protein_coding
ENSMUST00000140566 (Xxylt1-004) 30957461-31061427 processed_transcript
ENSMUST00000142870 (Xxylt1-003) 31007792-31067853 processed_transcript
ENSMUST00000153859 (Xxylt1-002) 31007750-31069826 processed_transcript
ENSMUSG00000049076 (Acap2)
ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 		ENSMUST00000058033 (Acap2-201) 31092413-31201238 protein_coding
ENSMUSG00000087605 (Gm15742)
predicted gene 15742 		ENSMUST00000123905 (Gm15742-001) 30969393-30973518 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CC_0001ENSG00000114331ENST00000326793ENST00000423531ENST00000439666ENST00000439758ENST00000447662ENST00000450200ENST00000466876ENST00000471593ENST00000472860ENST00000475905ENST00000480906ENST00000481463ENST00000484296ENST00000490224ENST00000618471ENSG00000173950ENST00000310380ENST00000356740ENST00000418940ENST00000429994ENST00000437101ENST00000455281ENST00000460582ENST00000473200ENST00000476897ENST00000491138ENST00000494175ENST00000496644ENSG00000207368ENST00000384638ENSG00000227433ENST00000434369ENSG00000229325ENST00000419899ENSG00000230266ENST00000426468ENST00000447975ENSG00000244314ENST00000469345CIL_0006CC_0002ENSMUSG00000047434ENSMUST00000055389ENSMUST00000140566ENSMUST00000142870ENSMUST00000153859ENSMUSG00000049076ENSMUST00000058033ENSMUSG00000087605ENSMUST00000123905
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006CC_0001ENSG00000114331ENST00000326793ENST00000450200ENST00000480906ENST00000618471ENSG00000173950ENST00000310380ENST00000429994ENST00000437101ENST00000491138ENSG00000207368ENST00000384638ENSG00000227433ENST00000434369ENSG00000229325ENST00000419899ENSG00000230266ENST00000426468ENST00000447975ENSG00000244314ENST00000469345CIL_0006CC_0002ENSMUSG00000047434ENSMUST00000055389ENSMUST00000140566ENSMUSG00000049076ENSMUST00000058033ENSMUSG00000087605ENSMUST00000123905
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114331 ENST00000326793 6.508±0.00 3.866±0.00 2.748±0.00 2.704±0.00 3.452±1.10 3.104±0.80 1.688±0.40 1.873±0.87 3.349±2.13 4.650±3.09 1.168±0.45 3.344±2.00 1.875±0.71 1.115±0.00
ENST00000423531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.953±0.00
ENST00000466876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.596±0.00 N/A N/A N/A
ENST00000481463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618471 N/A N/A N/A 2.017±0.00 N/A 2.524±0.00 N/A N/A 3.960±0.00 3.966±0.00 N/A 2.119±0.00 N/A N/A
ENSG00000173950 ENST00000310380 4.342±0.00 6.377±0.00 0.457±0.00 1.571±1.33 2.872±0.00 0.673±0.21 1.146±0.00 2.022±1.82 0.569±0.33 1.318±1.14 0.562±0.23 2.619±2.76 9.301±2.45 0.683±0.23
ENST00000356740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429994 N/A N/A N/A N/A N/A 0.422±0.00 N/A 0.624±0.00 1.397±0.00 N/A 0.233±0.00 N/A N/A N/A
ENST00000437101 N/A N/A N/A N/A 0.838±0.00 N/A N/A N/A N/A N/A N/A 0.434±0.00 N/A N/A
ENST00000455281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491138 N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207368 ENST00000384638 N/A 0.169±0.00 N/A 0.335±0.00 19.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227433 ENST00000434369 N/A 0.165±0.00 N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229325 ENST00000419899 0.079±0.00 0.294±0.00 2.256±0.00 4.361±0.00 1.331±0.97 4.475±0.00 0.103±0.01 0.133±0.00 0.555±0.54 1.788±1.53 N/A 0.570±0.50 N/A 0.096±0.01
ENSG00000230266 ENST00000426468 N/A 1.086±0.00 0.626±0.00 N/A N/A 0.141±0.00 N/A 0.356±0.00 0.089±0.00 0.712±0.00 N/A 0.698±0.00 0.427±0.32 0.094±0.00
ENST00000447975 0.056±0.00 1.110±0.00 N/A 0.122±0.00 N/A N/A 0.018±0.00 N/A N/A 0.248±0.00 0.246±0.00 0.082±0.02 0.256±0.13 0.034±0.00
ENSG00000244314 ENST00000469345 N/A 0.271±0.00 N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047434 ENSMUST00000055389 7.918±2.03 14.578±1.07 3.964±0.94 3.668±0.24 8.722±2.58 6.972±0.89 4.120±0.20 5.718±0.79 1.053±0.18 8.531±0.95 0.560±0.09 14.509±1.03 1.888±0.61 0.700±0.09
ENSMUST00000140566 6.425±0.62 N/A N/A N/A 5.930±0.77 N/A N/A 4.321±0.00 3.351±0.00 6.124±0.00 N/A 10.949±0.17 N/A 0.949±0.00
ENSMUST00000142870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049076 ENSMUST00000058033 8.284±3.85 13.958±1.99 15.583±3.67 5.219±0.94 11.529±3.24 15.533±4.62 2.850±0.54 4.784±1.35 3.825±0.42 21.033±2.62 1.456±0.44 15.653±5.35 4.631±1.08 1.615±0.64
ENSMUSG00000087605 ENSMUST00000123905 0.157±0.10 0.124±0.03 0.060±0.00 0.071±0.00 0.192±0.04 0.256±0.07 0.118±0.08 0.192±0.14 0.125±0.09 0.176±0.09 0.098±0.02 0.333±0.27 0.061±0.02 N/A

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