C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymocyte selection associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056097 Themis-001 ENSMUSG00000049109 10090 + 10:28668360-28883815 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056097
Transcript ID Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056097 0.023±0.00 0.596±0.26 0.015±0.00 0.065±0.00 0.044±0.00 0.027±0.00 0.147±0.00 0.040±0.03 0.019±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005911 IDA cell-cell junction
GO:0008180 IDA COP9 signalosome
GO:0043368 IMP positive T cell selection
GO:0043383 IMP negative T cell selection
GO:0050852 IMP T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368248 THEMIS-201 protein_coding Homo_sapiens 0 1857
ENST00000368250 THEMIS-001 protein_coding Homo_sapiens 0 1857
ENST00000537166 THEMIS-202 protein_coding Homo_sapiens 0 1731
ENST00000610842 THEMIS-203 protein_coding Homo_sapiens 0 1731
ENST00000613862 THEMIS-204 protein_coding Homo_sapiens 0 1857
ENST00000614155 THEMIS-205 protein_coding Homo_sapiens 0 1635

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