C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 2C-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056198 Pp2d1-201 ENSMUSG00000044957 10090 - 17:53507460-53539451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000056198
Transcript ID Testis
ENSMUST00000056198 11.028±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VJ CIL_0002VJ_0003 CGP 17:53398889-53507671
CIL_0004HT CIL_0004HT_0002 CGP 17:53479234-53539451
CIL_0004HU CIL_0004HU_0002 CGP 17:53507460-53672720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273047 RAB5A-001 protein_coding Homo_sapiens 0 254

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