C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056410 Gemin8-001 ENSMUSG00000040621 10090 + X:166170454-166190512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056410 3.163±0.94 3.974±0.70 2.829±0.26 3.283±0.39 1.922±0.52 1.714±0.21 0.929±0.40 3.635±0.72 1.944±1.44 2.408±0.34 0.349±0.03 6.018±2.77 1.867±0.01 3.354±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 ISS spliceosomal snRNP assembly
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005829 ISS cytosol
GO:0032797 ISS SMN complex
GO:0034719 ISS SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332885 GEMIN8-003 protein_coding Homo_sapiens 0 263
ENST00000380523 GEMIN8-001 protein_coding Homo_sapiens 0 457
ENST00000380526 GEMIN8P4-001 processed_pseudogene Homo_sapiens 0 370
ENST00000398355 GEMIN8-002 protein_coding Homo_sapiens 0 466
ENST00000445417 GEMIN8P3-001 processed_pseudogene Homo_sapiens 0 243
ENST00000451703 TRAK2-005 processed_transcript Homo_sapiens 0.00000007 62
ENST00000460203 GEMIN8-005 processed_transcript Homo_sapiens 0 213
ENST00000477386 GEMIN8-004 processed_transcript Homo_sapiens 0 213
ENST00000560960 RP11-19J5.1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000569855 GEMIN8P2-001 processed_pseudogene Homo_sapiens 3e-17 94

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