C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gem (nuclear organelle) associated protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380523 GEMIN8-001 ENSG00000046647 9606 - X:14008279-14029892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyOvaryENST00000380523
Transcript ID Adipose Heart Kidney Ovary
ENST00000380523 0.365±0.00 0.694±0.00 0.245±0.00 1.692±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 IDA spliceosomal snRNP assembly
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0032797 IDA SMN complex
GO:0034719 IDA SMN-Sm protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058710 Gm5455-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000087169 Gemin8-002 protein_coding Mus_musculus 0 457
ENSMUST00000056410 Gemin8-001 protein_coding Mus_musculus 0 457
ENSMUST00000130880 Gemin8-003 protein_coding Mus_musculus 0 457
ENSMUST00000152248 Gemin8-004 protein_coding Mus_musculus 0 278
ENSMUST00000118320 4930503H13Rik-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000166440 Gemin8-006 protein_coding Mus_musculus 0 202
ENSMUST00000140278 Cdkal1-007 nonsense_mediated_decay Mus_musculus 0.0000002 62

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