C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: excision repair cross-complementing rodent repair deficiency complementation group 6 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056904 Ercc6l-001 ENSMUSG00000051220 10090 - X:102141716-102157091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056904 0.544±0.39 0.045±0.02 0.267±0.04 0.713±0.41 0.324±0.05 0.780±0.17 0.110±0.01 0.133±0.02 1.972±2.29 0.340±0.08 0.054±0.02 0.789±0.27 1.999±1.16 0.527±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066A CIL_00066A_0002 CGP X:102119447-102157091
CIL_0006RO CIL_0006RO_0002 CGP X:102141716-102189394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269724 SAMD1-002 protein_coding Homo_sapiens 0.0003 53
ENST00000334463 ERCC6L-002 protein_coding Homo_sapiens 0 2752
ENST00000373657 ERCC6L-001 protein_coding Homo_sapiens 0 2728
ENST00000533683 SAMD1-001 protein_coding Homo_sapiens 0.0003 53

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