C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006RO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186871-ENSG00000198034 CGP 9606 X:72204657-72277300
GeneTranscriptPositionBiotype
ENSG00000186871 (ERCC6L)
excision repair cross-complementation group 6-like 		ENST00000334463 (ERCC6L-002) 72204660-72239047 protein_coding
ENST00000373657 (ERCC6L-001) 72204657-72239027 protein_coding
ENSG00000198034 (RPS4X)
ribosomal protein S4, X-linked 		ENST00000316084 (RPS4X-001) 72272042-72277300 protein_coding
ENST00000373626 (RPS4X-002) 72274255-72277248 protein_coding
ENST00000470671 (RPS4X-004) 72255679-72273371 processed_transcript
ENST00000486733 (RPS4X-003) 72272713-72276227 processed_transcript
ENST00000492695 (RPS4X-005) 72255784-72272723 processed_transcript
CIL_0006RO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051220-ENSMUSG00000031320 CGP 10090 X:102141716-102189394
GeneTranscriptPositionBiotype
ENSMUSG00000031320 (Rps4x)
ribosomal protein S4, X-linked 		ENSMUST00000033683 (Rps4x-001) 102184941-102189394 protein_coding
ENSMUST00000152739 (Rps4x-002) 102187627-102189336 retained_intron
ENSMUST00000155028 (Rps4x-003) 102185074-102186737 retained_intron
ENSMUSG00000051220 (Ercc6l)
excision repair cross-complementing rodent repair deficiency complementation group 6 like 		ENSMUST00000056904 (Ercc6l-001) 102141716-102157091 protein_coding
ENSMUSG00000084142 (Gm9103)
predicted gene 9103 		ENSMUST00000119371 (Gm9103-001) 102178194-102178657 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RO_0001ENSG00000186871ENST00000334463ENST00000373657ENSG00000198034ENST00000316084ENST00000373626ENST00000470671ENST00000486733ENST00000492695CIL_0006RO_0002ENSMUSG00000031320ENSMUST00000033683ENSMUST00000152739ENSMUST00000155028ENSMUSG00000051220ENSMUST00000056904ENSMUSG00000084142ENSMUST00000119371
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006RO_0001ENSG00000186871ENST00000334463ENST00000373657ENSG00000198034ENST00000316084CIL_0006RO_0002ENSMUSG00000031320ENSMUST00000033683ENSMUST00000155028ENSMUSG00000051220ENSMUST00000056904ENSMUSG00000084142ENSMUST00000119371
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186871 ENST00000334463 N/A 0.072±0.00 0.292±0.00 0.024±0.02 0.252±0.20 0.452±0.35 0.038±0.01 0.050±0.03 0.016±0.00 0.053±0.04 0.029±0.00 1.473±0.75 0.288±0.19 0.610±0.07
ENST00000373657 0.075±0.00 N/A N/A 0.020±0.00 N/A N/A N/A 0.076±0.00 0.020±0.00 N/A N/A N/A N/A N/A
ENSG00000198034 ENST00000316084 487.882±0.00 130.741±0.00 54.367±0.00 107.688±23.11 248.881±167.76 402.691±271.14 44.753±7.05 185.131±94.35 109.396±2.13 260.979±147.04 85.879±57.99 617.922±540.41 472.887±367.41 180.759±142.29
ENST00000373626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031320 ENSMUST00000033683 292.706±126.66 32.815±2.36 903.252±45.95 199.758±119.73 281.409±101.63 165.462±24.39 170.131±7.02 199.859±32.99 441.657±379.12 240.097±29.64 216.810±15.70 297.094±326.75 428.914±252.42 14.886±6.63
ENSMUST00000152739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155028 N/A 13.275±0.62 N/A N/A N/A N/A N/A N/A N/A N/A N/A 53.657±9.42 N/A N/A
ENSMUSG00000051220 ENSMUST00000056904 0.544±0.39 0.045±0.02 0.267±0.04 0.713±0.41 0.324±0.05 0.780±0.17 0.110±0.01 0.133±0.02 1.972±2.29 0.340±0.08 0.054±0.02 0.789±0.27 1.999±1.16 0.527±0.06
ENSMUSG00000084142 ENSMUST00000119371 N/A N/A N/A 0.106±0.07 N/A N/A N/A N/A 0.053±0.03 0.136±0.00 N/A N/A 0.535±0.47 N/A

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