C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 518B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057258 Zfp518b-001 ENSMUSG00000046572 10090 - 5:38668484-38684750 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000057258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000057258 1.531±0.49 0.588±0.17 0.271±0.13 0.940±0.20 0.463±0.00 0.739±0.11 0.254±0.14 0.148±0.09 0.463±0.00 1.887±0.38 1.975±1.37 0.381±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514
CIL_0001XG CIL_0001XG_0002 CGP 5:38526814-38684826
CIL_0001XH CIL_0001XH_0002 CGP 5:38668484-38876812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326756 ZNF518B-001 protein_coding Homo_sapiens 0 254

Loading