C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactomedin-like 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057279 Olfml2a-001 ENSMUSG00000046618 10090 + 2:38931978-38963753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057279 4.715±2.29 3.470±0.63 3.221±1.55 1.344±1.08 3.361±1.17 1.209±0.13 1.541±0.44 0.462±0.05 0.057±0.02 5.688±0.29 0.947±0.16 10.141±1.19 0.270±0.07 0.499±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075J CIL_00075J_0002 CGP 2:38723370-38963753
CIL_00075G CIL_00075G_0002 CGP 2:38931978-39006168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0030198 IDA extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0042803 IPI protein homodimerization activity
GO:0050840 IDA extracellular matrix binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288815 OLFML2A-003 protein_coding Homo_sapiens 0 981
ENST00000294794 OLFML2B-001 protein_coding Homo_sapiens 0 318
ENST00000331715 OLFML2A-001 protein_coding Homo_sapiens 0 315
ENST00000367938 OLFML2B-002 protein_coding Homo_sapiens 0 318
ENST00000367940 OLFML2B-006 protein_coding Homo_sapiens 0 318
ENST00000373580 OLFML2A-002 protein_coding Homo_sapiens 0 981
ENST00000525589 OLFML2B-004 nonsense_mediated_decay Homo_sapiens 2e-27 126
ENST00000533556 OLFML2B-003 nonsense_mediated_decay Homo_sapiens 5e-28 128

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