C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00075G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185585-ENSG00000136918 CGP 9606 9:124777158-124857890
GeneTranscriptPositionBiotype
ENSG00000136942 (RPL35)
ribosomal protein L35 		ENST00000348462 (RPL35-001) 124857884-124861961 protein_coding
ENST00000373570 (RPL35-005) 124857880-124861915 protein_coding
ENST00000487431 (RPL35-004) 124857883-124861936 retained_intron
ENST00000493018 (RPL35-003) 124857883-124861935 nonsense_mediated_decay
ENST00000495728 (RPL35-002) 124860979-124861981 retained_intron
ENSG00000185585 (OLFML2A)
olfactomedin-like 2A 		ENST00000288815 (OLFML2A-003) 124800874-124814885 protein_coding
ENST00000331715 (OLFML2A-001) 124777158-124804236 protein_coding
ENST00000373580 (OLFML2A-002) 124777271-124814878 protein_coding
CIL_00075G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046618-ENSMUSG00000035295 CGP 10090 2:38931978-39006168
GeneTranscriptPositionBiotype
ENSMUSG00000035295 (Wdr38)
WD repeat domain 38 		ENSMUST00000039535 (Wdr38-003) 38997476-39006168 nonsense_mediated_decay
ENSMUST00000112872 (Wdr38-001) 38998319-39001582 protein_coding
ENSMUST00000124062 (Wdr38-002) 38998332-39000274 processed_transcript
ENSMUSG00000046618 (Olfml2a)
olfactomedin-like 2A 		ENSMUST00000057279 (Olfml2a-001) 38931978-38963753 protein_coding
ENSMUSG00000062997 (Rpl35)
ribosomal protein L35 		ENSMUST00000080861 (Rpl35-001) 39001580-39005624 protein_coding
ENSMUST00000126246 (Rpl35-002) 39004612-39005122 processed_transcript
ENSMUST00000152441 (Rpl35-003) 39001619-39005043 processed_transcript
ENSMUSG00000083776 (Gm13473)
predicted gene 13473 		ENSMUST00000119289 (Gm13473-001) 38939343-38939929 processed_pseudogene
ENSMUSG00000084184 (Gm13474)
predicted gene 13474 		ENSMUST00000122466 (Gm13474-001) 38973947-38976816 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075G_0001ENSG00000136942ENST00000348462ENST00000373570ENST00000487431ENST00000493018ENST00000495728ENSG00000185585ENST00000288815ENST00000331715ENST00000373580CIL_00075G_0002ENSMUSG00000035295ENSMUST00000039535ENSMUST00000112872ENSMUST00000124062ENSMUSG00000046618ENSMUST00000057279ENSMUSG00000062997ENSMUST00000080861ENSMUST00000126246ENSMUST00000152441ENSMUSG00000083776ENSMUST00000119289ENSMUSG00000084184ENSMUST00000122466
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075G_0001ENSG00000136942ENST00000348462ENSG00000185585ENST00000288815ENST00000331715ENST00000373580CIL_00075G_0002ENSMUSG00000035295ENSMUST00000039535ENSMUST00000112872ENSMUSG00000046618ENSMUST00000057279ENSMUSG00000062997ENSMUST00000080861ENSMUST00000126246ENSMUST00000152441ENSMUSG00000083776ENSMUST00000119289ENSMUSG00000084184ENSMUST00000122466
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136942 ENST00000348462 672.799±0.00 930.722±0.00 22.319±0.00 182.935±89.11 362.450±238.74 552.751±443.75 135.441±104.78 267.201±155.89 293.575±183.85 761.984±697.72 565.870±386.78 1208.662±676.99 1266.519±379.84 560.106±125.76
ENST00000373570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185585 ENST00000288815 N/A 1.565±0.00 N/A 0.048±0.00 N/A N/A N/A 1.294±0.00 0.031±0.00 N/A N/A 3.329±2.73 1.040±0.39 0.783±0.00
ENST00000331715 N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A
ENST00000373580 23.337±0.00 2.797±0.00 0.496±0.00 0.709±0.56 10.246±9.37 9.092±7.32 5.541±4.51 0.846±0.72 4.667±0.00 5.916±4.10 4.935±4.27 7.163±5.02 2.927±0.50 1.611±0.83
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035295 ENSMUST00000039535 N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.235±15.97
ENSMUST00000124062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046618 ENSMUST00000057279 4.715±2.29 3.470±0.63 3.221±1.55 1.344±1.08 3.361±1.17 1.209±0.13 1.541±0.44 0.462±0.05 0.057±0.02 5.688±0.29 0.947±0.16 10.141±1.19 0.270±0.07 0.499±0.30
ENSMUSG00000062997 ENSMUST00000080861 85.797±27.63 23.843±5.10 302.210±22.75 181.402±4.64 48.400±20.46 70.585±26.73 43.946±8.99 67.602±25.34 188.135±180.22 65.630±1.99 53.456±11.32 72.611±27.49 184.228±102.86 84.479±39.12
ENSMUST00000126246 N/A N/A N/A 265.015±0.00 26.149±0.00 321.618±7.99 N/A 199.054±0.00 60.762±11.26 N/A N/A 630.882±238.22 798.427±34.79 140.984±0.00
ENSMUST00000152441 N/A 19.264±9.67 N/A 52.504±0.00 8.078±0.00 N/A N/A N/A N/A N/A N/A 822.976±440.10 434.792±314.67 43.298±0.00
ENSMUSG00000083776 ENSMUST00000119289 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 N/A 0.238±0.01 0.117±0.09 N/A
ENSMUSG00000084184 ENSMUST00000122466 0.048±0.00 N/A N/A 0.061±0.00 0.186±0.00 N/A N/A N/A 0.009±0.00 N/A 0.085±0.00 0.196±0.09 0.088±0.04 0.367±0.00

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