C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: valosin containing protein (p97)/p47 complex interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057438 Vcpip1-001 ENSMUSG00000045210 10090 - 1:9718622-9748382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057438 1.523±0.52 0.584±0.06 2.547±0.74 3.128±1.55 1.018±0.19 0.727±0.15 0.741±0.10 1.220±0.25 1.997±0.86 1.687±0.30 1.289±0.14 1.627±1.57 5.196±0.81 2.752±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050B CIL_00050B_0002 CGP 1:9667415-9748382
CIL_0003BG CIL_0003BG_0002 CGP 1:9718622-9900845

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006508 IEA proteolysis
GO:0007030 IEA Golgi organization
GO:0007067 IEA mitotic nuclear division
GO:0016320 IEA endoplasmic reticulum membrane fusion
GO:0016567 ISS protein ubiquitination
GO:0035871 ISS protein K11-linked deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination
GO:0090168 IEA Golgi reassembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310421 VCPIP1-001 protein_coding Homo_sapiens 0 5875

Loading