C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: valosin containing protein (p97)/p47 complex interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310421 VCPIP1-001 ENSG00000175073 9606 - 8:66628487-66667217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310421 3.422±0.00 3.029±0.00 1.627±0.00 4.589±0.26 3.087±0.23 3.018±1.28 1.911±0.13 3.202±0.38 3.062±1.75 3.934±2.35 2.324±0.84 2.053±0.97 1.276±0.63 5.336±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050B CIL_00050B_0001 CGP 8:66562175-66667217
CIL_0003BG CIL_0003BG_0001 CGP 8:66628487-66860472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006508 IEA proteolysis
GO:0007030 IEA Golgi organization
GO:0007067 IEA mitotic nuclear division
GO:0016320 IEA endoplasmic reticulum membrane fusion
GO:0016567 ISS protein ubiquitination
GO:0035871 IDA protein K11-linked deubiquitination
GO:0071108 IDA protein K48-linked deubiquitination
GO:0090168 IEA Golgi reassembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057438 Vcpip1-001 protein_coding Mus_musculus 0 5875

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