C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium inwardly-rectifying channel, subfamily J, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057801 Kcnj4-201 ENSMUSG00000044216 10090 - 15:79483718-79505241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057801 0.070±0.04 0.961±0.82 0.034±0.02 11.883±16.56 0.038±0.02 0.044±0.02 0.061±0.04 0.027±0.01 0.007±0.00 0.014±0.00 0.035±0.00 0.116±0.07 0.039±0.01 0.258±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0005DH CIL_0005DH_0002 CGP 15:79417856-79505241
CIL_0005DI CIL_0005DI_0002 CGP 15:79483718-79527739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 IEA inward rectifier potassium channel activity
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0030165 IEA PDZ domain binding
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022533 kcnj2a-201 protein_coding Danio_rerio 0 292
ENST00000303592 KCNJ4-001 protein_coding Homo_sapiens 0 2091

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