C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A730035I17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057889 A730035I17Rik-201 ENSMUSG00000045238 10090 - 5:98185296-98185984 pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000057889
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000057889 0.051±0.04 11.539±0.00 0.350±0.09 0.104±0.03 0.050±0.00 0.048±0.00 1.136±0.30 0.124±0.07 0.393±0.34 19.484±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069U CIL_00069U_0002 CGP 5:97882783-98187448
CIL_00069V CIL_00069V_0002 CGP 5:98180869-98277030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339711 PRDM8-201 protein_coding Homo_sapiens 0 431
ENST00000415738 PRDM8-001 protein_coding Homo_sapiens 0 431
ENST00000504452 PRDM8-003 protein_coding Homo_sapiens 0 431
ENST00000515013 PRDM8-004 protein_coding Homo_sapiens 0 409

Loading