C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415738 PRDM8-001 ENSG00000152784 9606 + 4:80197504-80204324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000415738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000415738 0.943±0.00 0.472±0.00 0.418±0.00 9.861±0.06 0.556±0.03 1.328±0.65 0.187±0.10 0.310±0.22 1.245±1.19 0.140±0.00 0.142±0.00 0.137±0.00 0.564±0.25 0.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069U CIL_00069U_0001 CGP 4:79901149-80204329
CIL_00069V CIL_00069V_0001 CGP 4:80183879-80336680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006351 IEA transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112959 Prdm8-201 protein_coding Mus_musculus 0 2861
ENSMUST00000057889 A730035I17Rik-201 pseudogene Mus_musculus 0 431

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