C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitchondrial ribosomal protein S7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058109 Mrps7-001 ENSMUSG00000046756 10090 + 11:115603925-115608036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000058109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000058109 27.163±3.73 33.328±6.53 21.161±2.79 14.055±3.04 19.759±4.62 14.141±2.69 17.991±1.01 34.937±7.38 24.317±4.08 11.062±1.12 26.748±4.61 18.821±4.09 30.954±13.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IW CIL_0007IW_0002 CGP 11:115564434-115604051
CIL_0007I1 CIL_0007I1_0002 CGP 11:115584255-115608036
CIL_0003KI CIL_0003KI_0003 CGP 11:115603925-115612969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0003735 ISS structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 ISA mitochondrial small ribosomal subunit
GO:0006412 ISS translation
GO:0022627 ISS cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000061665 mrps7-001 protein_coding Danio_rerio 0.000000000002 79
ENST00000245539 MRPS7-001 protein_coding Homo_sapiens 0 678
ENST00000544148 RP11-6B19.3-001 processed_pseudogene Homo_sapiens 0 313
ENST00000579002 MRPS7-003 protein_coding Homo_sapiens 0 643
ENST00000579761 MRPS7-002 protein_coding Homo_sapiens 0 438
ENST00000581993 MRPS7-005 protein_coding Homo_sapiens 0 532
ENST00000583407 MRPS7-007 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000584678 MRPS7-006 protein_coding Homo_sapiens 0 523

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