C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125450-ENSG00000125447 CGP 9606 17:75205659-75262363
GeneTranscriptPositionBiotype
ENSG00000125445 (MRPS7)
mitochondrial ribosomal protein S7 		ENST00000245539 (MRPS7-001) 75261674-75266373 protein_coding
ENST00000577767 (MRPS7-004) 75262609-75263289 retained_intron
ENST00000579002 (MRPS7-003) 75261912-75266330 protein_coding
ENST00000579761 (MRPS7-002) 75261674-75264490 protein_coding
ENST00000581993 (MRPS7-005) 75262626-75266363 protein_coding
ENST00000583407 (MRPS7-007) 75261961-75266084 nonsense_mediated_decay
ENST00000584678 (MRPS7-006) 75262673-75266373 protein_coding
ENSG00000125447 (GGA3)
golgi-associated, gamma adaptin ear containing, ARF binding protein 3 		ENST00000537686 (GGA3-002) 75236599-75261804 protein_coding
ENST00000538886 (GGA3-001) 75236599-75261600 protein_coding
ENST00000577435 (GGA3-012) 75242889-75261617 nonsense_mediated_decay
ENST00000578208 (GGA3-018) 75238357-75238985 retained_intron
ENST00000578348 (GGA3-004) 75237284-75262361 protein_coding
ENST00000578773 (GGA3-021) 75238246-75239551 nonsense_mediated_decay
ENST00000578896 (GGA3-016) 75240949-75242368 retained_intron
ENST00000579743 (GGA3-011) 75243517-75262358 protein_coding
ENST00000580646 (GGA3-020) 75237522-75239538 nonsense_mediated_decay
ENST00000580799 (GGA3-013) 75241669-75261593 protein_coding
ENST00000582232 (GGA3-017) 75240794-75241733 retained_intron
ENST00000582376 (GGA3-014) 75243135-75261593 nonsense_mediated_decay
ENST00000582486 (GGA3-006) 75237427-75262361 protein_coding
ENST00000582717 (GGA3-005) 75238238-75262363 protein_coding
ENST00000582821 (GGA3-009) 75241865-75261590 retained_intron
ENST00000583282 (GGA3-019) 75237526-75239081 protein_coding
ENST00000583667 (GGA3-023) 75238965-75240437 retained_intron
ENST00000584243 (GGA3-015) 75242884-75261585 nonsense_mediated_decay
ENST00000584550 (GGA3-022) 75238179-75239545 nonsense_mediated_decay
ENST00000613421 (GGA3-007) 75236602-75261623 retained_intron
ENST00000614198 (GGA3-010) 75236600-75240450 retained_intron
ENST00000621217 (GGA3-008) 75236599-75261621 nonsense_mediated_decay
ENST00000621870 (GGA3-003) 75236599-75261600 nonsense_mediated_decay
ENSG00000125450 (NUP85)
nucleoporin 85kDa 		ENST00000245544 (NUP85-001) 75205691-75235758 protein_coding
ENST00000449421 (NUP85-003) 75205709-75226978 processed_transcript
ENST00000540768 (NUP85-006) 75228161-75235757 protein_coding
ENST00000577208 (NUP85-010) 75205720-75216344 processed_transcript
ENST00000577561 (NUP85-013) 75218293-75225949 retained_intron
ENST00000577645 (NUP85-014) 75225368-75231977 retained_intron
ENST00000578294 (NUP85-020) 75232920-75234782 retained_intron
ENST00000578830 (NUP85-012) 75215801-75232954 nonsense_mediated_decay
ENST00000578987 (NUP85-021) 75234667-75235757 nonsense_mediated_decay
ENST00000579298 (NUP85-004) 75205720-75235691 protein_coding
ENST00000579324 (NUP85-002) 75205707-75235757 protein_coding
ENST00000579557 (NUP85-025) 75225103-75232952 protein_coding
ENST00000579838 (NUP85-023) 75234704-75235757 protein_coding
ENST00000579900 (NUP85-024) 75233125-75235758 protein_coding
ENST00000580879 (NUP85-018) 75226108-75232947 nonsense_mediated_decay
ENST00000581104 (NUP85-005) 75205720-75235710 nonsense_mediated_decay
ENST00000581335 (NUP85-017) 75227948-75229126 processed_transcript
ENST00000582681 (NUP85-019) 75231138-75232941 retained_intron
ENST00000582833 (NUP85-007) 75205707-75208620 processed_transcript
ENST00000583070 (NUP85-016) 75225391-75235152 protein_coding
ENST00000583548 (NUP85-009) 75205720-75216365 processed_transcript
ENST00000583569 (NUP85-008) 75205659-75215775 protein_coding
ENST00000583877 (NUP85-011) 75218208-75226157 protein_coding
ENST00000583948 (NUP85-015) 75205690-75226058 processed_transcript
ENST00000584155 (NUP85-022) 75234753-75235752 nonsense_mediated_decay
CIL_0007IW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020739-ENSMUSG00000020740 CGP 10090 11:115564434-115604051
GeneTranscriptPositionBiotype
ENSMUSG00000020739 (Nup85)
nucleoporin 85 		ENSMUST00000021085 (Nup85-001) 115564434-115583985 protein_coding
ENSMUST00000127126 (Nup85-009) 115581096-115582034 processed_transcript
ENSMUST00000128745 (Nup85-008) 115581748-115582278 processed_transcript
ENSMUST00000134209 (Nup85-007) 115583057-115583783 processed_transcript
ENSMUST00000135893 (Nup85-005) 115564525-115569891 processed_transcript
ENSMUST00000138998 (Nup85-004) 115581641-115583906 processed_transcript
ENSMUST00000140986 (Nup85-002) 115577984-115582039 protein_coding
ENSMUST00000143351 (Nup85-006) 115580504-115581419 processed_transcript
ENSMUST00000144473 (Nup85-003) 115570115-115581843 protein_coding
ENSMUSG00000020740 (Gga3)
golgi associated, gamma adaptin ear containing, ARF binding protein 3 		ENSMUST00000019135 (Gga3-001) 115584255-115604051 protein_coding
ENSMUST00000106508 (Gga3-002) 115584255-115604051 protein_coding
ENSMUST00000123485 (Gga3-010) 115585704-115589055 processed_transcript
ENSMUST00000123831 (Gga3-009) 115587936-115603876 processed_transcript
ENSMUST00000125097 (Gga3-007) 115591642-115603893 protein_coding
ENSMUST00000128437 (Gga3-006) 115585787-115603884 processed_transcript
ENSMUST00000132503 (Gga3-005) 115592517-115603880 processed_transcript
ENSMUST00000136790 (Gga3-012) 115587585-115588027 processed_transcript
ENSMUST00000148782 (Gga3-008) 115588477-115603888 processed_transcript
ENSMUST00000149814 (Gga3-004) 115592499-115603724 processed_transcript
ENSMUST00000154832 (Gga3-011) 115584364-115589521 processed_transcript
ENSMUST00000156173 (Gga3-003) 115584255-115604051 nonsense_mediated_decay
ENSMUSG00000046756 (Mrps7)
mitchondrial ribosomal protein S7 		ENSMUST00000058109 (Mrps7-001) 115603925-115608036 protein_coding
ENSMUST00000141556 (Mrps7-002) 115604867-115607001 processed_transcript
ENSMUSG00000089476 (Gm25364)
predicted gene, 25364 		ENSMUST00000158851 (Gm25364-201) 115601656-115601762 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IW_0001ENSG00000125445ENST00000245539ENST00000579002ENST00000583407ENST00000584678ENSG00000125447ENST00000537686ENST00000538886ENST00000580799ENST00000582717ENST00000613421ENST00000621870ENSG00000125450ENST00000245544ENST00000540768ENST00000577208ENST00000577561ENST00000577645ENST00000578294ENST00000578830ENST00000578987ENST00000579298ENST00000579324ENST00000579557ENST00000581104ENST00000583070ENST00000583877ENST00000583948CIL_0007IW_0002ENSMUSG00000020739ENSMUST00000021085ENSMUST00000138998ENSMUST00000140986ENSMUST00000144473ENSMUSG00000020740ENSMUST00000019135ENSMUST00000106508ENSMUST00000148782ENSMUST00000154832ENSMUSG00000046756ENSMUST00000058109ENSMUST00000141556ENSMUSG00000089476ENSMUST00000158851
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125445 ENST00000245539 10.635±0.00 11.662±0.00 N/A 11.286±0.65 8.633±2.86 7.642±1.97 20.843±10.80 8.892±4.15 17.671±0.00 15.306±0.00 11.344±0.00 14.962±5.54 29.364±5.00 14.330±0.00
ENST00000577767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579002 N/A N/A N/A N/A N/A N/A N/A 7.793±0.00 N/A N/A N/A 12.321±0.00 N/A 16.178±0.00
ENST00000579761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583407 14.121±0.00 20.185±0.00 N/A 16.721±0.00 18.044±0.00 17.504±0.00 37.770±0.00 13.704±10.46 29.760±0.00 28.884±0.00 17.749±2.97 16.905±6.52 22.556±2.89 19.623±0.00
ENST00000584678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.251±0.00 N/A N/A N/A
ENSG00000125447 ENST00000537686 N/A N/A N/A 3.202±0.00 N/A N/A N/A N/A N/A N/A N/A 6.896±0.00 6.285±0.00 N/A
ENST00000538886 6.198±0.00 9.380±0.00 N/A 4.498±0.00 2.991±1.55 4.222±0.00 N/A 5.823±0.00 N/A 8.610±0.00 10.909±0.00 6.526±0.11 5.386±0.41 7.752±0.00
ENST00000577435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580799 N/A N/A N/A N/A 7.578±0.00 N/A N/A N/A N/A 8.503±0.00 N/A N/A N/A N/A
ENST00000582232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582717 N/A N/A N/A N/A N/A N/A N/A 1.280±0.00 1.704±0.00 N/A N/A 2.464±0.00 N/A 13.775±0.00
ENST00000582821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613421 N/A 4.272±0.00 1.036±0.00 N/A N/A N/A 1.487±0.00 N/A N/A 1.708±0.00 N/A 1.496±0.00 N/A N/A
ENST00000614198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621870 N/A N/A N/A N/A N/A 1.760±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125450 ENST00000245544 2.251±0.00 N/A N/A N/A 2.052±1.20 2.051±1.46 1.979±0.00 N/A N/A N/A N/A 7.430±0.18 6.145±5.80 12.816±0.00
ENST00000449421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540768 N/A 4.180±0.00 N/A N/A 1.704±1.18 N/A 1.015±0.81 0.310±0.00 N/A 1.978±0.00 N/A 4.852±0.00 N/A 3.820±0.00
ENST00000577208 N/A N/A N/A 3.698±0.00 N/A N/A 0.999±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000577561 N/A N/A 0.822±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577645 N/A N/A N/A 1.256±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.499±0.00 N/A N/A N/A
ENST00000578830 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.786±0.00 N/A N/A N/A N/A
ENST00000578987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.942±0.00
ENST00000579298 N/A N/A 0.260±0.00 1.456±0.00 N/A N/A N/A N/A N/A N/A 3.135±0.00 2.528±1.05 4.242±0.00 N/A
ENST00000579324 2.351±0.00 3.854±0.00 N/A N/A N/A N/A N/A N/A 2.443±0.00 N/A 2.241±0.00 N/A 2.197±0.66 N/A
ENST00000579557 N/A N/A 0.621±0.00 N/A N/A N/A N/A N/A N/A N/A 4.396±0.00 2.644±0.00 N/A N/A
ENST00000579838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581104 N/A 5.387±0.00 N/A 1.412±0.00 3.042±0.00 N/A 1.052±0.57 4.733±0.00 1.501±0.00 2.281±0.00 N/A 1.025±0.00 N/A 3.493±0.00
ENST00000581335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583070 5.632±0.00 N/A 0.542±0.00 4.576±0.00 N/A 7.226±0.00 N/A 7.989±7.03 3.459±0.00 N/A N/A N/A 7.308±1.10 N/A
ENST00000583548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583877 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.790±0.00 N/A N/A N/A N/A
ENST00000583948 N/A N/A N/A 1.482±0.00 0.871±0.00 2.730±0.00 0.545±0.00 1.850±0.00 1.034±0.00 3.057±0.00 N/A N/A N/A N/A
ENST00000584155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020739 ENSMUST00000021085 9.768±1.81 6.887±2.45 21.037±0.55 21.868±1.42 10.344±3.67 7.314±2.28 6.292±1.56 7.438±2.12 24.548±21.91 9.301±2.83 7.799±1.13 16.873±6.52 20.766±17.21 11.045±2.89
ENSMUST00000127126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138998 N/A N/A N/A 9.215±0.00 14.772±6.97 N/A 4.719±0.48 6.831±0.72 N/A 7.315±0.00 4.508±0.00 16.423±1.15 18.065±13.22 9.444±0.38
ENSMUST00000140986 N/A 6.746±0.00 N/A N/A 21.497±0.00 N/A N/A N/A N/A N/A N/A 9.940±0.00 N/A N/A
ENSMUST00000143351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.342±0.00 N/A
ENSMUSG00000020740 ENSMUST00000019135 9.030±0.31 N/A 9.594±1.90 10.647±1.18 8.668±0.44 6.455±0.52 4.324±0.67 6.571±0.50 7.300±1.41 8.275±0.87 4.561±0.70 7.239±1.02 8.027±1.49 N/A
ENSMUST00000106508 N/A N/A N/A 8.941±0.00 N/A N/A N/A N/A N/A N/A N/A 6.669±0.00 N/A N/A
ENSMUST00000123485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148782 N/A N/A N/A 27.490±0.00 N/A N/A N/A N/A N/A N/A N/A 21.365±0.00 11.705±0.00 N/A
ENSMUST00000149814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154832 8.349±0.06 8.502±1.85 3.688±0.03 5.237±0.91 9.230±3.82 5.346±1.51 N/A N/A N/A 6.685±1.16 N/A 7.264±2.25 3.094±0.00 N/A
ENSMUST00000156173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046756 ENSMUST00000058109 27.163±3.73 33.328±6.53 21.161±2.79 14.055±3.04 19.759±4.62 14.141±2.69 17.991±1.01 34.937±7.38 24.317±4.08 11.062±1.12 26.748±4.61 18.821±4.09 30.954±13.43 N/A
ENSMUST00000141556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.130±0.00 N/A
ENSMUSG00000089476 ENSMUST00000158851 N/A N/A N/A N/A N/A N/A N/A N/A 21.330±0.00 N/A N/A 124.700±0.00 70.413±0.00 N/A

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