C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000245539 MRPS7-001 ENSG00000125445 9606 + 17:75261674-75266373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245539
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245539 10.635±0.00 11.662±0.00 11.286±0.65 8.633±2.86 7.642±1.97 20.843±10.80 8.892±4.15 17.671±0.00 15.306±0.00 11.344±0.00 14.962±5.54 29.364±5.00 14.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IW CIL_0007IW_0001 CGP 17:75205659-75262363
CIL_0007I1 CIL_0007I1_0001 CGP 17:75236599-75266373
CIL_0003KI CIL_0003KI_0002 CGP 17:75261674-75271227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0003735 ISS structural constituent of ribosome
GO:0005739 IEA mitochondrion
GO:0006412 ISS translation
GO:0022627 ISS cytosolic small ribosomal subunit
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058109 Mrps7-001 protein_coding Mus_musculus 0 678
ENSMUST00000141556 Mrps7-002 processed_transcript Mus_musculus 0 435

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