C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058286 Rps6kb1-002 ENSMUSG00000020516 10090 - 11:86513983-86544774 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039N CIL_00039N_0002 CGP 11:86267033-86499025
CIL_0008VS CIL_0008VS_0002 VISTA 11:86270110-86871719
CIL_0008Y2 CIL_0008Y2_0002 VISTA 11:86286196-86887829
CIL_00081F CIL_00081F_0002 VISTA 11:86323484-86925483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA protein kinase activity
GO:0004712 ISO protein serine/threonine/tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IDA protein phosphorylation
GO:0007281 IDA germ cell development
GO:0043491 IGI protein kinase B signaling
GO:2001237 IMP negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225577 RPS6KB1-001 protein_coding Homo_sapiens 0 931
ENST00000393021 RPS6KB1-201 protein_coding Homo_sapiens 0 684
ENST00000406116 RPS6KB1-002 protein_coding Homo_sapiens 0 948
ENST00000441215 AC126365.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 211
ENST00000443572 RPS6KB1-008 protein_coding Homo_sapiens 0 612
ENST00000472940 RPS6KB1-003 nonsense_mediated_decay Homo_sapiens 0 909
ENST00000477179 RPS6KB1-005 processed_transcript Homo_sapiens 0 616
ENST00000489824 RPS6KB1-004 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000577881 RP11-51L5.3-001 unprocessed_pseudogene Homo_sapiens 0 231
ENST00000578210 AC126365.1-002 processed_transcript Homo_sapiens 0 470
ENST00000587622 RPS6KB1-009 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000592726 RPS6KB1-007 protein_coding Homo_sapiens 0 381

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