C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 29 (nucleoside transporters), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058418 Slc29a4-201 ENSMUSG00000050822 10090 + 5:142702101-142722490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058418 0.358±0.38 19.907±5.19 0.138±0.06 31.050±23.55 0.329±0.13 1.966±0.79 0.225±0.02 0.333±0.04 0.043±0.04 0.697±0.21 0.092±0.00 1.389±0.64 0.835±1.35 0.149±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M3 CIL_0002M3_0002 CGP 5:142629542-142722490
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825
CIL_00027K CIL_00027K_0003 CGP 5:142702101-142817662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005337 IEA nucleoside transmembrane transporter activity
GO:0005886 IEA plasma membrane
GO:0008504 IEA monoamine transmembrane transporter activity
GO:0015844 IEA monoamine transport
GO:0016021 IEA integral component of membrane
GO:1901642 IEA nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110932 si:ch211-160d14.6-201 protein_coding Danio_rerio 0 239
ENSDART00000152367 si:ch211-160d14.6-001 protein_coding Danio_rerio 0 239
ENST00000297195 SLC29A4-002 protein_coding Homo_sapiens 0 1539
ENST00000396872 SLC29A4-001 protein_coding Homo_sapiens 0 1543
ENST00000398760 SLC29A4P1-001 unprocessed_pseudogene Homo_sapiens 0 843
ENST00000406453 SLC29A4-003 protein_coding Homo_sapiens 0 1109
ENST00000439491 SLC29A4-006 processed_transcript Homo_sapiens 0 446
ENST00000504749 SLC29A4P2-001 unprocessed_pseudogene Homo_sapiens 0 599

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