C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059690-ENSDARG00000077052 CGP 7955 3:40310192-40483628
GeneTranscriptPositionBiotype
ENSDARG00000059690 (slc29a4)
solute carrier family 29 (nucleoside transporters), member 4 		ENSDART00000083241 (slc29a4-201) 40310192-40344515 protein_coding
ENSDART00000132827 (slc29a4-001) 40310195-40344282 protein_coding
ENSDARG00000077052 (tnrc18)
trinucleotide repeat containing 18 		ENSDART00000103486 (tnrc18-201) 40403882-40483626 protein_coding
ENSDART00000155112 (tnrc18-001) 40402134-40483628 protein_coding
ENSDARG00000080611 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000117221 (5S_rRNA.56-201) 40447309-40447423 rRNA
ENSDARG00000097119 (si:ch211-194i10.6)
si:ch211-194i10.6 		ENSDART00000154236 (si:ch211-194i10.6-001) 40392644-40399935 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_00027K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164638-ENSG00000182095 CGP 9606 7:5274369-5425414
GeneTranscriptPositionBiotype
ENSG00000164638 (SLC29A4)
solute carrier family 29 (equilibrative nucleoside transporter), member 4 		ENST00000297195 (SLC29A4-002) 5282969-5304060 protein_coding
ENST00000396872 (SLC29A4-001) 5282930-5306870 protein_coding
ENST00000406453 (SLC29A4-003) 5283029-5304060 protein_coding
ENST00000434816 (SLC29A4-004) 5274369-5291766 protein_coding
ENST00000439491 (SLC29A4-006) 5299329-5303680 processed_transcript
ENST00000444741 (SLC29A4-005) 5282962-5291767 protein_coding
ENSG00000188365 (AC092171.2)
 ENST00000455866 (AC092171.2-001) 5419846-5423122 antisense
ENSG00000241269 (AC093620.5)
 ENST00000342963 (AC093620.5-001) 5419827-5420767 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00027K_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050822-ENSMUSG00000039477 CGP 10090 5:142702101-142817662
GeneTranscriptPositionBiotype
ENSMUSG00000039477 (Tnrc18)
trinucleotide repeat containing 18 		ENSMUST00000036253 (Tnrc18-201) 142754796-142817387 protein_coding
ENSMUST00000151477 (Tnrc18-001) 142754789-142817662 protein_coding
ENSMUST00000152247 (Tnrc18-003) 142750380-142788523 protein_coding
ENSMUST00000155461 (Tnrc18-002) 142788309-142800437 processed_transcript
ENSMUSG00000050822 (Slc29a4)
solute carrier family 29 (nucleoside transporters), member 4 		ENSMUST00000058418 (Slc29a4-201) 142702101-142722490 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027K_0001ENSDARG00000059690ENSDART00000083241ENSDART00000132827ENSDARG00000077052ENSDART00000103486ENSDART00000155112ENSDARG00000080611ENSDART00000117221ENSDARG00000097119ENSDART00000154236CIL_00027K_0002ENSG00000164638ENST00000297195ENST00000396872ENST00000406453ENST00000434816ENST00000439491ENST00000444741ENSG00000188365ENST00000455866ENSG00000241269ENST00000342963CIL_00027K_0003ENSMUSG00000039477ENSMUST00000036253ENSMUST00000151477ENSMUST00000152247ENSMUST00000155461ENSMUSG00000050822ENSMUST00000058418
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027K_0001ENSDARG00000059690ENSDART00000083241ENSDART00000132827ENSDARG00000077052ENSDART00000103486ENSDART00000155112ENSDARG00000080611ENSDART00000117221ENSDARG00000097119ENSDART00000154236CIL_00027K_0002ENSG00000164638ENST00000297195ENST00000406453ENSG00000188365ENST00000455866ENSG00000241269ENST00000342963CIL_00027K_0003ENSMUSG00000039477ENSMUST00000036253ENSMUST00000151477ENSMUST00000152247ENSMUSG00000050822ENSMUST00000058418
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059690 ENSDART00000083241 N/A N/A N/A N/A N/A N/A 0.803±0.03 N/A 0.058±0.00 N/A N/A N/A N/A N/A
ENSDART00000132827 N/A N/A N/A 17.955±1.92 N/A N/A 0.249±0.00 1.104±0.00 0.443±0.00 N/A 3.008±0.00 N/A N/A N/A
ENSDARG00000077052 ENSDART00000103486 N/A N/A N/A 12.145±0.98 N/A N/A 2.962±0.61 3.628±0.67 0.120±0.00 N/A 1.858±0.00 N/A N/A N/A
ENSDART00000155112 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSDARG00000080611 ENSDART00000117221 N/A N/A N/A 151.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097119 ENSDART00000154236 N/A N/A N/A 1.184±0.58 N/A N/A 0.348±0.05 0.079±0.00 N/A N/A 0.647±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164638 ENST00000297195 N/A N/A N/A 1.691±0.00 59.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406453 N/A N/A N/A N/A 35.472±0.00 N/A N/A N/A N/A N/A 0.729±0.00 N/A N/A N/A
ENST00000434816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188365 ENST00000455866 0.065±0.00 0.380±0.00 0.334±0.00 0.150±0.01 0.411±0.31 0.063±0.00 0.094±0.03 N/A 0.606±0.00 0.319±0.00 N/A 0.249±0.12 0.099±0.00 0.420±0.00
ENSG00000241269 ENST00000342963 0.068±0.00 0.488±0.00 N/A 0.200±0.00 0.962±0.27 0.384±0.07 N/A N/A 0.806±0.00 N/A N/A 0.198±0.09 0.178±0.00 0.384±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039477 ENSMUST00000036253 1.458±0.63 5.185±2.57 N/A 7.372±3.49 1.493±0.26 2.971±1.55 0.447±0.01 1.482±0.69 0.513±0.22 1.726±0.00 N/A 3.175±0.92 N/A 1.395±0.51
ENSMUST00000151477 1.259±0.15 1.794±0.00 N/A 4.215±0.25 4.783±0.00 N/A N/A 2.117±0.57 0.301±0.09 N/A N/A 7.103±0.00 3.218±2.53 1.155±0.29
ENSMUST00000152247 1.197±0.43 N/A N/A N/A 1.864±0.00 N/A 0.686±0.00 1.529±0.55 0.710±0.23 1.633±0.00 N/A 6.892±4.21 9.972±0.00 N/A
ENSMUST00000155461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050822 ENSMUST00000058418 0.358±0.38 19.907±5.19 0.138±0.06 31.050±23.55 0.329±0.13 1.966±0.79 0.225±0.02 0.333±0.04 0.043±0.04 0.697±0.21 0.092±0.00 1.389±0.64 0.835±1.35 0.149±0.09

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