C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157954-ENSG00000164638 CGP 9606 7:5190188-5306870
GeneTranscriptPositionBiotype
ENSG00000157954 (WIPI2)
WD repeat domain, phosphoinositide interacting 2 		ENST00000288828 (WIPI2-001) 5190188-5233826 protein_coding
ENST00000382384 (WIPI2-007) 5190273-5231470 protein_coding
ENST00000401525 (WIPI2-002) 5190196-5231524 protein_coding
ENST00000404704 (WIPI2-008) 5190246-5231104 protein_coding
ENST00000465102 (WIPI2-014) 5214561-5222812 retained_intron
ENST00000466014 (WIPI2-003) 5190259-5230947 retained_intron
ENST00000471851 (WIPI2-006) 5225950-5231723 retained_intron
ENST00000475309 (WIPI2-004) 5214186-5219031 retained_intron
ENST00000479690 (WIPI2-013) 5229408-5231327 retained_intron
ENST00000480238 (WIPI2-011) 5216172-5225854 processed_transcript
ENST00000484262 (WIPI2-005) 5214269-5231064 protein_coding
ENST00000485854 (WIPI2-010) 5190265-5214702 processed_transcript
ENST00000488359 (WIPI2-012) 5216591-5225978 processed_transcript
ENST00000496867 (WIPI2-009) 5190693-5218013 processed_transcript
ENSG00000164638 (SLC29A4)
solute carrier family 29 (equilibrative nucleoside transporter), member 4 		ENST00000297195 (SLC29A4-002) 5282969-5304060 protein_coding
ENST00000396872 (SLC29A4-001) 5282930-5306870 protein_coding
ENST00000406453 (SLC29A4-003) 5283029-5304060 protein_coding
ENST00000434816 (SLC29A4-004) 5274369-5291766 protein_coding
ENST00000439491 (SLC29A4-006) 5299329-5303680 processed_transcript
ENST00000444741 (SLC29A4-005) 5282962-5291767 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002M3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029578-ENSMUSG00000050822 CGP 10090 5:142629542-142722490
GeneTranscriptPositionBiotype
ENSMUSG00000029578 (Wipi2)
WD repeat domain, phosphoinositide interacting 2 		ENSMUST00000036872 (Wipi2-001) 142629542-142670588 protein_coding
ENSMUST00000110778 (Wipi2-003) 142629593-142667487 protein_coding
ENSMUST00000143980 (Wipi2-004) 142662514-142664644 retained_intron
ENSMUST00000153936 (Wipi2-002) 142629591-142662709 retained_intron
ENSMUSG00000050822 (Slc29a4)
solute carrier family 29 (nucleoside transporters), member 4 		ENSMUST00000058418 (Slc29a4-201) 142702101-142722490 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M3_0001ENSG00000157954ENST00000288828ENST00000382384ENST00000401525ENST00000404704ENST00000465102ENST00000466014ENST00000471851ENST00000475309ENST00000479690ENST00000480238ENST00000484262ENST00000485854ENST00000488359ENST00000496867ENSG00000164638ENST00000297195ENST00000396872ENST00000406453ENST00000434816ENST00000439491ENST00000444741CIL_0002M3_0002ENSMUSG00000029578ENSMUST00000036872ENSMUST00000110778ENSMUST00000143980ENSMUST00000153936ENSMUSG00000050822ENSMUST00000058418
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M3_0001ENSG00000157954ENST00000288828ENST00000382384ENST00000401525ENST00000404704ENST00000465102ENST00000471851ENST00000479690ENST00000484262ENST00000485854ENST00000496867ENSG00000164638ENST00000297195ENST00000406453CIL_0002M3_0002ENSMUSG00000029578ENSMUST00000036872ENSMUST00000110778ENSMUST00000153936ENSMUSG00000050822ENSMUST00000058418
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157954 ENST00000288828 N/A N/A N/A 2.817±0.00 4.078±0.00 2.756±1.92 0.896±0.71 1.798±0.00 3.261±0.00 2.827±0.00 N/A 4.437±3.54 8.047±3.49 N/A
ENST00000382384 7.145±0.00 N/A N/A 7.578±3.97 13.053±0.00 3.631±2.03 7.530±0.00 4.761±2.01 7.782±0.00 4.080±2.43 5.015±3.08 6.275±1.87 8.957±1.53 16.768±1.24
ENST00000401525 16.104±0.00 18.072±0.00 N/A 10.212±0.00 8.289±6.69 8.433±0.00 3.858±0.00 13.035±0.00 2.785±0.00 N/A 6.637±0.00 8.645±2.39 15.002±2.74 19.745±0.00
ENST00000404704 N/A N/A N/A N/A 3.989±0.00 N/A 1.103±0.00 1.661±0.00 1.768±0.00 5.168±3.32 N/A 8.724±6.67 9.549±2.67 74.192±0.00
ENST00000465102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A
ENST00000466014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471851 N/A N/A 0.806±0.00 1.610±0.00 N/A N/A 0.550±0.00 N/A 0.985±0.00 N/A N/A 2.427±0.00 N/A N/A
ENST00000475309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.646±0.00
ENST00000480238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484262 N/A N/A 1.638±0.00 3.095±0.00 N/A 1.791±0.00 N/A N/A N/A N/A 1.021±0.00 N/A N/A N/A
ENST00000485854 N/A N/A N/A N/A N/A N/A 1.111±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000488359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496867 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.612±0.00 2.366±0.00 6.637±0.00 N/A N/A
ENSG00000164638 ENST00000297195 N/A N/A N/A 1.691±0.00 59.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406453 N/A N/A N/A N/A 35.472±0.00 N/A N/A N/A N/A N/A 0.729±0.00 N/A N/A N/A
ENST00000434816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029578 ENSMUST00000036872 15.917±0.65 16.669±2.69 11.948±2.81 12.382±1.57 12.230±2.56 15.741±1.57 6.827±0.67 19.775±1.85 12.374±2.62 12.291±2.57 4.739±0.88 19.682±7.83 9.149±2.38 8.204±3.19
ENSMUST00000110778 11.560±0.00 20.334±12.83 6.523±0.00 5.205±0.53 11.351±2.93 10.281±2.35 5.600±0.44 17.081±3.73 9.350±2.60 7.083±0.89 3.274±0.47 12.692±4.66 9.697±2.75 12.618±7.98
ENSMUST00000143980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153936 4.217±0.00 7.429±0.00 N/A 2.956±0.02 4.212±0.00 4.577±0.47 N/A N/A 1.601±0.00 3.558±0.00 N/A 5.223±2.06 N/A N/A
ENSMUSG00000050822 ENSMUST00000058418 0.358±0.38 19.907±5.19 0.138±0.06 31.050±23.55 0.329±0.13 1.966±0.79 0.225±0.02 0.333±0.04 0.043±0.04 0.697±0.21 0.092±0.00 1.389±0.64 0.835±1.35 0.149±0.09

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