C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058735 Ubqln1-201 ENSMUSG00000005312 10090 - 13:58176156-58215653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058735 26.026±1.64 24.744±7.12 11.189±0.58 18.286±1.76 26.422±6.69 34.636±2.34 6.565±0.64 25.841±4.54 26.644±7.95 28.268±3.16 6.270±1.16 29.783±10.61 29.097±5.17 16.513±5.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F5 CIL_0006F5_0002 CGP 13:58157649-58215653
CIL_0000XO CIL_0000XO_0002 CGP 13:58176156-58274188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005102 NAS receptor binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0019215 NAS intermediate filament binding
GO:0019900 ISS kinase binding
GO:0019904 IEA protein domain specific binding
GO:0031396 ISS regulation of protein ubiquitination
GO:0034976 IEA response to endoplasmic reticulum stress
GO:0043234 IEA protein complex
GO:0048471 ISS perinuclear region of cytoplasm
GO:0071456 ISS cellular response to hypoxia
GO:1902175 ISS regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257468 UBQLN1-002 protein_coding Homo_sapiens 0 1188
ENST00000338222 UBQLN2-001 protein_coding Homo_sapiens 0 250
ENST00000376395 UBQLN1-001 protein_coding Homo_sapiens 0 2091
ENST00000526134 UBQLN1-006 protein_coding Homo_sapiens 0 339
ENST00000527373 UBQLN1-005 retained_intron Homo_sapiens 0 233
ENST00000533705 UBQLN1-003 retained_intron Homo_sapiens 0 946

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