C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376395 UBQLN1-001 ENSG00000135018 9606 - 9:83659963-83708203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376395 22.848±0.00 8.944±0.00 2.619±0.00 24.095±15.71 13.166±8.67 14.452±9.25 8.312±6.12 16.707±11.60 14.029±7.77 12.805±6.71 13.052±8.98 18.232±7.03 21.069±1.60 16.988±4.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F5 CIL_0006F5_0001 CGP 9:83623049-83708203
CIL_0000XO CIL_0000XO_0001 CGP 9:83659963-83829516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0003684 IEA damaged DNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0006289 IEA nucleotide-excision repair
GO:0019900 IPI kinase binding
GO:0019904 IEA protein domain specific binding
GO:0031396 IDA regulation of protein ubiquitination
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043234 IDA protein complex
GO:0048471 NAS perinuclear region of cytoplasm
GO:0071456 IMP cellular response to hypoxia
GO:1902175 IMP regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058735 Ubqln1-201 protein_coding Mus_musculus 0 2091
ENSMUST00000076454 Ubqln1-202 protein_coding Mus_musculus 0 1188
ENSMUST00000060714 Ubqln2-001 protein_coding Mus_musculus 0 368

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