C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338222 UBQLN2-001 ENSG00000188021 9606 + X:56563639-56567868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338222
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338222 7.578±0.00 5.174±0.00 2.416±0.00 10.544±6.74 4.258±0.78 5.541±3.64 4.762±3.65 5.521±3.10 3.165±0.14 5.333±3.07 8.088±6.66 7.239±2.92 7.765±1.00 4.207±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057D CIL_00057D_0001 CGP X:56232421-56567868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003684 IEA damaged DNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006289 IEA nucleotide-excision repair
GO:0008219 IEA cell death
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060714 Ubqln2-001 protein_coding Mus_musculus 0 3216
ENSMUST00000076454 Ubqln1-202 protein_coding Mus_musculus 0 250
ENSMUST00000058735 Ubqln1-201 protein_coding Mus_musculus 0 250

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